Clone Read LE_HBa0117O11_SP6_40244

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0117O11_SP6_40244
Primer
SP6
ID from Seq. Facility
LE_HBa_117_O11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
749 trimmed for vector and quality, 933 raw
Genbank Accession
Sequence
>LE_HBa0117O11_SP6_40244 (raw untrimmed)
CCACGGTTTTTGGGAATCCTAAGAAGAAAGAGGATCTTCTTCTCATGCTAACAGTGCTGCTACTGGAGGACATCAGCTTCCTGAAAGTGGAGCCTATGAT
GATTCCTCTGTAAGTACTAATGCTAAGTCCTATGGTACCTCTCCTAACAATCTCTCACTAAATACACAAGGCATGTCACTCTTTACAAATGAACAATACA
ATCAGATTATACATATGTTGAGCAAAGGAAAAGGCAAGGAAGCAGATTTTATGGCAAATGTTGCAACTGCAAGATGGCAAATGTTGCAACTGCAAGTTCA
TCAGGTACTTTTATAGCTCTCACATCTGATGTGGTTCATTCCAACTGGATTATAGATACAGGTGCTCAAACCATATGGTTCACAGTTTGATTCTTATGAA
ACAGTGTACAGACCTTGGATTTAAAAGTGATATGAAAGTAAATTTTTCTACTGGTGCTCAGGTGGCTATTAGTCATGTTGGAGATTCACTAGTTCTTAAG
GATAAACTAGTGAAGGATGTTCTCTTTATCCCAGATTTTCAGTATGACCTATTATTTGTCTCCAACTAACTAAACAACTAAAGTGTGCAGTAATATTTTT
CCCTAACTTCTGTATCTTTCATGATCTCTTCAGTGGGAGGGTCCTGGGATTGGTAAGGAAGATCAAGGTTTATATCTTCTCAATACAGAGCTACAATCAA
GTACTTTACAAGACAATATTACTAGGATTTCATGTATCAGTTCTCCTATCAGCTTTACTTCTGTTTGTTCACTAAATTATCTTTGGCAAAAGAGATGGGG
CATGCCCCTTTCACATTTCTCGGTTAAATACAATGTTTACAGAATGGACCTATGAAGACCAAAATTGGACTGTTTGTCCTATTGAAAACAAAAAAATTAC
CTTTCCTACAAGTGGGTTTCGTCTATGCTTGTT
>LE_HBa0117O11_SP6_40244 (trimmed for quality and cloning vector)
TAAGAAGAAAGAGGATCTTCTTCTCATGCTAACAGTGCTGCTACTGGAGGACATCAGCTTCCTGAAAGTGGAGCCTATGATGATTCCTCTGTAAGTACTA
ATGCTAAGTCCTATGGTACCTCTCCTAACAATCTCTCACTAAATACACAAGGCATGTCACTCTTTACAAATGAACAATACAATCAGATTATACATATGTT
GAGCAAAGGAAAAGGCAAGGAAGCAGATTTTATGGCAAATGTTGCAACTGCAAGATGGCAAATGTTGCAACTGCAAGTTCATCAGGTACTTTTATAGCTC
TCACATCTGATGTGGTTCATTCCAACTGGATTATAGATACAGGTGCTCAAACCATATGGTTCACAGTTTGATTCTTATGAAACAGTGTACAGACCTTGGA
TTTAAAAGTGATATGAAAGTAAATTTTTCTACTGGTGCTCAGGTGGCTATTAGTCATGTTGGAGATTCACTAGTTCTTAAGGATAAACTAGTGAAGGATG
TTCTCTTTATCCCAGATTTTCAGTATGACCTATTATTTGTCTCCAACTAACTAAACAACTAAAGTGTGCAGTAATATTTTTCCCTAACTTCTGTATCTTT
CATGATCTCTTCAGTGGGAGGGTCCTGGGATTGGTAAGGAAGATCAAGGTTTATATCTTCTCAATACAGAGCTACAATCAAGTACTTTACAAGACAATAT
TACTAGGATTTCATGTATCAGTTCTCCTATCAGCTTTACTTCTGTTTGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953111
Expected error %
0.0954762
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0117O11
Clone
Clone name
hba-117o11
LE_HBa0117O11
P117O11
Clone type
BAC
Contamination
none
Estimated length
75,110
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found