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Clone Read LE_HBa0246B20_SP6_405080

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0246B20_SP6_405080
Primer
SP6
ID from Seq. Facility
LE_HBa_246_B20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
731 trimmed for vector and quality, 927 raw
Sequence
>LE_HBa0246B20_SP6_405080 (raw untrimmed)
TGTAGACGGCATGGTTGGANAGACCCGGATATGCTGCATTATCGTCCTTGTTACGATGGCAAACCTCTTAATGAGCTACATATTCATTCACCATAGCTAT
CATCTTACATCAATAGAAATAATGAGCCAACCTTTTGAAGGTGCCCAATTGACCCGAATGTCCTCCTAAAGGAGTATCATGAAAAGTAGATATGAGTTGT
CGTAAAGGTCCTGTAGATCCCACATAAACCTTTCCTTACTTCCTTAACACACCATTAACGTTATGCCATAAATTAGGCCAATGTGCATCTACTGATAACA
GTGTAATCAACTCTTGAATGTATGTATCCTCATTATAACCCCTTTTGTTGAATCGCCGAAGTGACCCCGTTGTTCCAACAAGTACTTCAAACTGTGGTGA
TCAGTCTTAACCACAGTGTTTGAACTACAAATAATGTCTCCATTTATCTACTGCATTGAATAAAGCCATATATTCCTTCTCGTATATCGACTTGCCCCGA
TGTTTAGTAGCCAAAACTTTGCTGAAGAAAGCTATCGGTCTTCCTTGCTGCATAAGTACAACTCCAATACCCCCATGACTGGCATCAGTTTCAACCACAA
ATTCCTGTGTATAATCAGGAAGAGCCAATACAGGCGTAGTCGTCATAGGTACTTTAAGGTTTTCGAAAGCAGTCTCGGCATCCACACTCCATTTAAAAGC
CTCTTTCTATAACAAATCTGTGAGTGGCCTGCTGATAGTTCCATAATTCTGCACATACTTGCGATAGTAACCTAGTTTATCCCAAAAATCCTCTTAAAGC
TCGTAATGACTTAGGTCTAATCCCAATCCACCATAACAATAATCTTTGTTAGATCTGTCGCACCCCCTTCTTCAGTAATAAAATGGACCTAAAAATCCCC
CCGGGCTTGAACCAAAAAAAAACGATC
>LE_HBa0246B20_SP6_405080 (trimmed for quality and cloning vector)
CCGGATATGCTGCATTATCGTCCTTGTTACGATGGCAAACCTCTTAATGAGCTACATATTCATTCACCATAGCTATCATCTTACATCAATAGAAATAATG
AGCCAACCTTTTGAAGGTGCCCAATTGACCCGAATGTCCTCCTAAAGGAGTATCATGAAAAGTAGATATGAGTTGTCGTAAAGGTCCTGTAGATCCCACA
TAAACCTTTCCTTACTTCCTTAACACACCATTAACGTTATGCCATAAATTAGGCCAATGTGCATCTACTGATAACAGTGTAATCAACTCTTGAATGTATG
TATCCTCATTATAACCCCTTTTGTTGAATCGCCGAAGTGACCCCGTTGTTCCAACAAGTACTTCAAACTGTGGTGATCAGTCTTAACCACAGTGTTTGAA
CTACAAATAATGTCTCCATTTATCTACTGCATTGAATAAAGCCATATATTCCTTCTCGTATATCGACTTGCCCCGATGTTTAGTAGCCAAAACTTTGCTG
AAGAAAGCTATCGGTCTTCCTTGCTGCATAAGTACAACTCCAATACCCCCATGACTGGCATCAGTTTCAACCACAAATTCCTGTGTATAATCAGGAAGAG
CCAATACAGGCGTAGTCGTCATAGGTACTTTAAGGTTTTCGAAAGCAGTCTCGGCATCCACACTCCATTTAAAAGCCTCTTTCTATAACAAATCTGTGAG
TGGCCTGCTGATAGTTCCATAATTCTGCACA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970298
Expected error %
0.532405
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0246B20
Clone
Clone name
hba-246b20
LE_HBa0246B20
P246B20
Clone type
BAC
Contamination
none
Estimated length
177,812
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found