Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0246I24_SP6_405747

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0246I24_SP6_405747
Primer
SP6
ID from Seq. Facility
LE_HBa_246_I24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
538 trimmed for vector and quality, 950 raw
Sequence
>LE_HBa0246I24_SP6_405747 (raw untrimmed)
ACCCTTTATACTTTAATAAATATTTTCATTGAATTCTTATTTAATGGTTAATCAAAATGATTTAATTCGAGATAAATATGAGTGCAAATAAGTAGCTCAC
TATGATCCGCTAGCCATAGCCATTGGCGAAAACTAGGTCCATATAGCTGTTGAGTTTGCCGCCACCATCTTATATGAAAAAACTCCATAAAAAATAACGT
AGCTAGTCTAGTTCTAGTCAGTACTAATGGAAGTCGTTTCGATATACAAATGTGAATCCTCATCGAAGTCAGATTCATGGATAGGATCTAACAGTCATTG
AATCATATTAAGTTGCATTTGTAAAATTGAAGCCCTTTTAGATTATCAAAAAACCAGCATTGGGAATTGTATACCTGTTCAGATTCCCAATGTAATCATC
TCCTTATACTATGCTGGAGAAGAAACACTTTTTTTTTAAAAAAAATAAAACAAAATCAGATGGAAGAATTAGACTGTGTGGACGAATTCTATTTCTCAGT
ATTATTTGATTACGAAGAACCATTGTTCCCAATTTCAGATAAAATGTATGCTGAGGAATTGCAATTGCAAGAGGCCTTATATTCCGCAGCCACGGTTTCA
GAATACAATGAGTTTAAAAGAGTGAAGAGAGAATGTTCCCGTACATTTTGCAGTATCTGTACAAACAAACAACTCGCAAACGAAATGTTCGCCGCTGGAA
AATGTTCACATTCCTTCTGTGTTAATTGGGTCACTAAATAGTTTACAAAAAAATCGTACAAAAAAAAGGTAGCGTTTTCCAGTGTCCCGATAATGCTTGT
AAGGGCATATTTAAACCCAAGTTCTGGAAAGAATTTTTCCTTAACAAGTGGTTGATCAATTGGAAAAAAAAAACCGGGGTCTTTGGGGTCAAAAAAAATA
TACGGCTTCTTTTAAAGAACGTGTACCACTGGTTGTTTAAAAAAGAGAAN
>LE_HBa0246I24_SP6_405747 (trimmed for quality and cloning vector)
ATAAATATTTTCATTGAATTCTTATTTAATGGTTAATCAAAATGATTTAATTCGAGATAAATATGAGTGCAAATAAGTAGCTCACTATGATCCGCTAGCC
ATAGCCATTGGCGAAAACTAGGTCCATATAGCTGTTGAGTTTGCCGCCACCATCTTATATGAAAAAACTCCATAAAAAATAACGTAGCTAGTCTAGTTCT
AGTCAGTACTAATGGAAGTCGTTTCGATATACAAATGTGAATCCTCATCGAAGTCAGATTCATGGATAGGATCTAACAGTCATTGAATCATATTAAGTTG
CATTTGTAAAATTGAAGCCCTTTTAGATTATCAAAAAACCAGCATTGGGAATTGTATACCTGTTCAGATTCCCAATGTAATCATCTCCTTATACTATGCT
GGAGAAGAAACACTTTTTTTTTAAAAAAAATAAAACAAAATCAGATGGAAGAATTAGACTGTGTGGACGAATTCTATTTCTCAGTATTATTTGATTACGA
AGAACCATTGTTCCCAATTTCAGATAAAATGTATGCTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.943608
Expected error %
0.0488249
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0246I24
Clone
Clone name
hba-246i24
LE_HBa0246I24
P246I24
Clone type
BAC
Contamination
none
Estimated length
52,002
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found