Clone Read LE_HBa0247E22_SP6_406884

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0247E22_SP6_406884
Primer
SP6
ID from Seq. Facility
LE_HBa_247_E22-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
474 trimmed for vector and quality, 946 raw
Sequence
>LE_HBa0247E22_SP6_406884 (raw untrimmed)
CTCGGGATGGCGAGATGGACACTTGGCAACGAAGATAATGCTTCTAGACACACTCCATGCCCATTTGTACAGTTGGATGGCATTAACTTCAGTAGAGTAG
CCCCTTGCCATAGTATTACAGTTGCTCTGACAACATTACGGCAAGTATATACAATAGGGGAAAGTTGATTATGGGCAACTAGGAATTCCTGGAAGTACTG
GGAAGTTTCCTTCTCGTGTTCAAGGAAAAGTTACAGATTGTTTCATTGAAGAAATAGCTTGTGGATCTTTCCATGTTGTGTCCCTGAGCTCAAACTCTGA
GCTTTACACGTGGGGAAAGGGAGGAAATGGACAGCTAGGACATGGGGACTATCATGATAGGAACACTCCTACACTGGTTGAAGCGCTGAAAGCAAAAAAA
GTAAAGGATGTGGTCTGTGGAAATAATTTTACTGCAGCCATTTGTCTACACAGAGAAGTGTCTCTCGCTGATAATTCCATTTGTGCTGGATGCCAGAGTC
CATTTAATCTCAGACGAAAACGTCATAACTGCTACAACTGTGGGCTTGTCTTTTGCACAGTATGCACCATTAAAAGATCTGTAAGAGCTTCTTTGGCTCC
AAAAATGAACAAACCTTATCCGGTATGTGAAGATTGTTTTACTAAATTGAACAAGGGCTTGGATATTGGATTAATTTGTCTACCACCCAAAGTCCCTACT
GGGAAGCTTTAAGAAAAATACTGCATAGAAGAAGGAAAAATACCTCCCCTTCCAAAATTAAAAAGCCTTCTCTCTAAGCTGTCATATTTCAATTTCATTC
AAGTCTGAACGAAAATCGTTTTAGAAATAACCGCAATCAAGAATTCAACCCTTGAAAATGGCTCGTCCAATTCCTAAAGGCGAAATCCATAAGTGAAACT
ATTCCAACTACCTGCCCATTATGTTTCCTTATTCAAATGTTCCTTC
>LE_HBa0247E22_SP6_406884 (trimmed for quality and cloning vector)
AATGCTTCTAGACACACTCCATGCCCATTTGTACAGTTGGATGGCATTAACTTCAGTAGAGTAGCCCCTTGCCATAGTATTACAGTTGCTCTGACAACAT
TACGGCAAGTATATACAATAGGGGAAAGTTGATTATGGGCAACTAGGAATTCCTGGAAGTACTGGGAAGTTTCCTTCTCGTGTTCAAGGAAAAGTTACAG
ATTGTTTCATTGAAGAAATAGCTTGTGGATCTTTCCATGTTGTGTCCCTGAGCTCAAACTCTGAGCTTTACACGTGGGGAAAGGGAGGAAATGGACAGCT
AGGACATGGGGACTATCATGATAGGAACACTCCTACACTGGTTGAAGCGCTGAAAGCAAAAAAAGTAAAGGATGTGGTCTGTGGAAATAATTTTACTGCA
GCCATTTGTCTACACAGAGAAGTGTCTCTCGCTGATAATTCCATTTGTGCTGGATGCCAGAGTCCATTTAATCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.974107
Expected error %
0.794397
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0247E22
Clone
Clone name
hba-247e22
LE_HBa0247E22
C03HBa0247E22
P247E22
Clone type
BAC
Contamination
none
Estimated length
80,331
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found