Clone Read LE_HBa0041D17_SP6_42800

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0041D17_SP6_42800
Primer
SP6
ID from Seq. Facility
LE_HBa_041_D17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
609 trimmed for vector and quality, 832 raw
Genbank Accession
Sequence
>LE_HBa0041D17_SP6_42800 (raw untrimmed)
TTTAATGGTTATTCCCATATACNCAATTCACAATNGTACTCGGTAGGATCACACGACTATTTCAATAAGTTAAACATATATATTGCAGTTACAACAAGTA
AACACGCATATGCCAAACATATACAATATCATTATCATTTCAGAAGCAATGTACAATTTCACATTCTCAATAATACACATATGTAACAAGTCAATGATCC
TCTCATAGAAGCTATACCCAAACTGTAAGTGTGTCAGATCGTGACGCTCGATCCAAGTTTATGTGTCAGAACGTGACACTCGATCCAATATGTGTGTCGG
TACGTTACATTCGATCCAATACGTATGTCGATATGTGACATCCAATCCTAGTTAGTGTGTCGAAACGTGACACTCAACCCATTCAATATGTCACAATCAC
AATCACAATGTACATTTTCACAATCATACAATCACGTGTCGATTCATGACTTACAATCGTTCGTTCATACTCATTTACAATAAATGTGATCAATAATGCA
ACATTCACATACATATATGCAATACAATGAAGCAAATAATTACATACATCACACAAACATGAAATCACAATCATCATCTACCTCCTACACAAGCTTGAAT
CCCTCTAAGTCACTTGGATTTTCCGCAATTTGATACAAGGATAAAAAAAAGAGGCCTACCCCGATTGCAATCAATATTATTTGACCCTAAGACAAAACCT
TGATTCCCGTGCCCAATTTAGGGGTTTTCCCACATAAATATCATATCAATACCCTCCCTCATGGAATAATTCCCCCCAAGAACCTAATTCCCTCCCGGAT
CAAAAAAAATGAATTTGGGGGGTAAAATCCTT
>LE_HBa0041D17_SP6_42800 (trimmed for quality and cloning vector)
GGTAGGATCACACGACTATTTCAATAAGTTAAACATATATATTGCAGTTACAACAAGTAAACACGCATATGCCAAACATATACAATATCATTATCATTTC
AGAAGCAATGTACAATTTCACATTCTCAATAATACACATATGTAACAAGTCAATGATCCTCTCATAGAAGCTATACCCAAACTGTAAGTGTGTCAGATCG
TGACGCTCGATCCAAGTTTATGTGTCAGAACGTGACACTCGATCCAATATGTGTGTCGGTACGTTACATTCGATCCAATACGTATGTCGATATGTGACAT
CCAATCCTAGTTAGTGTGTCGAAACGTGACACTCAACCCATTCAATATGTCACAATCACAATCACAATGTACATTTTCACAATCATACAATCACGTGTCG
ATTCATGACTTACAATCGTTCGTTCATACTCATTTACAATAAATGTGATCAATAATGCAACATTCACATACATATATGCAATACAATGAAGCAAATAATT
ACATACATCACACAAACATGAAATCACAATCATCATCTACCTCCTACACAAGCTTGAATCCCTCTAAGTCACTTGGATTTTCCGCAATTTGATACAAGGA
TAAAAAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.925327
Expected error %
0.212896
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0041D17
Clone
Clone name
hba-41d17
LE_HBa0041D17
P041D17
Clone type
BAC
Contamination
none
Estimated length
104,689
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found