Clone Read LE_HBa0041O14_SP6_43322

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0041O14_SP6_43322
Primer
SP6
ID from Seq. Facility
LE_HBa_041_O14-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
567 trimmed for vector and quality, 834 raw
Genbank Accession
DU059560
Sequence
>LE_HBa0041O14_SP6_43322 (raw untrimmed)
TTTTGCAACCTCCACTTTTATATTAGAGGGTACATGGGGTAGGGGTCATCAATCCATAACACTTCATTAATGGCAGCACCTATACATGCTCTTAACATAG
ATATATACACGCATATACAATAGTCTTACAACCTAGATCACAACTAGAATAGGAAAGTAGGCATAAGCTTCACATAGTGTGATCATTGTAACCACACACT
CATGTATTCATCACTTTGACTTCAAGTCCATAGTCAACACATATTTAATGACAATAAAGCAAACACCGCCACCATAAGTGAACCATACCACACAATGTCA
TACAAGGCTTCATCATTTAACAATACTATAGAGAAATAGAGAAGTAGAAGAGTATAACAATTCTTACCAATCCTTTAGCCTTTGGTCATCATTGACCATT
ACTATTCTTTCATCAACAATTCGAATATAGGGCAGTATCTAAAGTACAATAATCATGAAAGAAACCATGTACAAGTCGCTACAAGATCATACTACAAGCT
AATACAATACATCACATATATACTAGAAAGTAGAGAGTTATAGATCATCAACCAATTTCCCTAGTCTTGTTCATCAATCAGATTTTATCAATAATATGAT
TTTAGGGAAGTATCTAAAGAGATAGAACATCATATCTTAATCATGCTTCATCCACCCCTAAAATATTTATCACAACATATACTTTACTCTACCAAGTCTA
TAGGCTATAAAAACCAAAATCCTTCCTTTACCAATTCCATGGGTTTCCTATTCTTTTTAAATCATTATTCCTTAATTATCCTCTCCATTATCCCCTAACG
GGGCTTCATCCTTACGTGACACTCTCCCTCTTAT
>LE_HBa0041O14_SP6_43322 (trimmed for quality and cloning vector)
GGGTAGGGGTCATCAATCCATAACACTTCATTAATGGCAGCACCTATACATGCTCTTAACATAGATATATACACGCATATACAATAGTCTTACAACCTAG
ATCACAACTAGAATAGGAAAGTAGGCATAAGCTTCACATAGTGTGATCATTGTAACCACACACTCATGTATTCATCACTTTGACTTCAAGTCCATAGTCA
ACACATATTTAATGACAATAAAGCAAACACCGCCACCATAAGTGAACCATACCACACAATGTCATACAAGGCTTCATCATTTAACAATACTATAGAGAAA
TAGAGAAGTAGAAGAGTATAACAATTCTTACCAATCCTTTAGCCTTTGGTCATCATTGACCATTACTATTCTTTCATCAACAATTCGAATATAGGGCAGT
ATCTAAAGTACAATAATCATGAAAGAAACCATGTACAAGTCGCTACAAGATCATACTACAAGCTAATACAATACATCACATATATACTAGAAAGTAGAGA
GTTATAGATCATCAACCAATTTCCCTAGTCTTGTTCATCAATCAGATTTTATCAATAATATGATTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.92543
Expected error %
0.372786
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0041O14
Clone
Clone name
hba-41o14
LE_HBa0041O14
P041O14
Clone type
BAC
Contamination
none
Estimated length
111,689
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found