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Clone Read LE_HBa0053D23_SP6_43580

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0053D23_SP6_43580
Primer
SP6
ID from Seq. Facility
LE_HBa_053_D23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
513 trimmed for vector and quality, 870 raw
Sequence
>LE_HBa0053D23_SP6_43580 (raw untrimmed)
AGGTGTTATCCCNNNNNCNNTCNNNNTCCNNNCANACANCCANAAACTTCAAAACGAACACGGTCTTCAAATACCGTAATTTGCTCATTAAAACATTTGC
CCTGATGAAGATTTCTCTTATCAGTTTTTGTTGAAATAATTCCTGCCCCTTCAGTGTAAAAAATAACCATAGGCATGTTGTTTTCTTCATCTCCCAACAC
TATTGACCTAAGGCATATTGCTGCATCTCTCACTCCGGTTCCCATCTCCATCTGTGATAAGTTTGAACTCGGAAAAAAGTTATTCTCTATCGAAAGGATG
TTGCCAACAAAAGTTTCTTTTTCTAACTGAATGGGGTCTTTCTTAGGCAATTGGTCTTCATGAGACCCACTGTCATTTATCCTAATTTGGTCCACCACTT
CTAATACAACTCCTGGGGCCACATTTTTTTATTATTTCCCTCACTTGTTTTTCATTCAGACCTGCGTGTTCCTCTTCCCCTTTCTTTTACCAAACTAACC
GTGTATCATTACTCAAAATGTTTTGCTCGGACTCCTTTGTGATACAAGTCATCAAAAATTTTTGTTGTGCGAACTCCCCTCCAGAAACAAGTTGTGTTGT
CATCTTTCTAATTCGCTGGACCTGCATTATATTCTAATTTCCACTGAATCTCTCCGCAACTTTTTCCATATTGGCTAAGAAAAAATTTATTCTCCTTCCC
CTCACTTATCGCCCTACTTTTCTTCTGAGACTCTTTTCCCGACTACTGCTCCTCNCCGGTTATTTTATAGCTGCGTTCTTCTTCTGTTTTTATTCCATGC
TACATGTTCCCTTTCTTTTCTTATTCTCAACTCTCATTTTATTTTTTGTCAATATTTTTTTTTAATTATT
>LE_HBa0053D23_SP6_43580 (trimmed for quality and cloning vector)
TCTTCAAATACCGTAATTTGCTCATTAAAACATTTGCCCTGATGAAGATTTCTCTTATCAGTTTTTGTTGAAATAATTCCTGCCCCTTCAGTGTAAAAAA
TAACCATAGGCATGTTGTTTTCTTCATCTCCCAACACTATTGACCTAAGGCATATTGCTGCATCTCTCACTCCGGTTCCCATCTCCATCTGTGATAAGTT
TGAACTCGGAAAAAAGTTATTCTCTATCGAAAGGATGTTGCCAACAAAAGTTTCTTTTTCTAACTGAATGGGGTCTTTCTTAGGCAATTGGTCTTCATGA
GACCCACTGTCATTTATCCTAATTTGGTCCACCACTTCTAATACAACTCCTGGGGCCACATTTTTTTATTATTTCCCTCACTTGTTTTTCATTCAGACCT
GCGTGTTCCTCTTCCCCTTTCTTTTACCAAACTAACCGTGTATCATTACTCAAAATGTTTTGCTCGGACTCCTTTGTGATACAAGTCATCAAAAATTTTT
GTTGTGCGAACTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.936327
Expected error %
0.589556
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0053D23
Clone
Clone name
hba-53d23
LE_HBa0053D23
P053D23
Clone type
BAC
Contamination
none
Estimated length
102,757
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found