Clone Read LE_HBa0056G15_T7_44477

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0056G15_T7_44477
Primer
T7
ID from Seq. Facility
LE_HBa_056_G15-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
538 trimmed for vector and quality, 900 raw
Sequence
>LE_HBa0056G15_T7_44477 (raw untrimmed)
TTCCGCCCACTCTTCCCACCGTGCTCCTCTTTAATCCACTTGCACGCATTGCAAGCTTGTACGTCAAACTGCGCATTAAGTCATATGTTTATTAACTTTT
CGAGCGTCTGTTACTTTGGTTTCTAAAGATTTCAGTTTTCACAAACCATTATGTTTTCACTGTTGGTGAATGGGTAAAAAGGATGGATCACATATGCGAA
CAGTTAGTTATTACTTTTGCATCTACCAACCGCTTATCCATCTTGCTATCTCTAACTCTTAGGCGCATGGTGAACATGGGGTCTGATTTTATCTAATAAC
ATTATATGTAACTTACTAAAAGCTATGCTGATAAAATTATAACCACCTTCAGACCATAGATAGAATATAAAGGGAAAAACTTACTTTGTTATTGATTTTT
GGAGAACGAGGAGAATGCCATGTCTCACTCACCCATGTTCGGCAATGTATAAAGCAAGAATTTACGAACATGCCCCCTTCTGGATTTTTGTGAAATCCAT
CGAGCGTTTTGAGCAAAGAATTTCGGAAATCTGTAGATAATGAATAATTTCATAAGGTGACAACATAGCAAGCATGCAAGTATCCTAATTACCTGGACTC
CTCAAATGATAAGCCTGGCTGCGGTATCTACACTTGCTGTTTTTACATGCAAATATTCACCTTGCAGGACTTCAAGCCAGTTTGGAATTCCCGTTGGTTA
ATACTTAGCTGGCCTCCTAACCAAACTTCGATGTGGATCTGGACGAACTAAAGTACCCAGAACTTTTTTTTCTTTTAACTATTAAACAGTAAGTTGTAGA
ACCTTCTTGAAACAAATTTTTTAATTAGATACTTTAAATCATCTTTGGGACAAAATCTTTTCTTCCCCCTAAATTCCCATCTCTGCCTTCAATCAACACA
>LE_HBa0056G15_T7_44477 (trimmed for quality and cloning vector)
GTCAAACTGCGCATTAAGTCATATGTTTATTAACTTTTCGAGCGTCTGTTACTTTGGTTTCTAAAGATTTCAGTTTTCACAAACCATTATGTTTTCACTG
TTGGTGAATGGGTAAAAAGGATGGATCACATATGCGAACAGTTAGTTATTACTTTTGCATCTACCAACCGCTTATCCATCTTGCTATCTCTAACTCTTAG
GCGCATGGTGAACATGGGGTCTGATTTTATCTAATAACATTATATGTAACTTACTAAAAGCTATGCTGATAAAATTATAACCACCTTCAGACCATAGATA
GAATATAAAGGGAAAAACTTACTTTGTTATTGATTTTTGGAGAACGAGGAGAATGCCATGTCTCACTCACCCATGTTCGGCAATGTATAAAGCAAGAATT
TACGAACATGCCCCCTTCTGGATTTTTGTGAAATCCATCGAGCGTTTTGAGCAAAGAATTTCGGAAATCTGTAGATAATGAATAATTTCATAAGGTGACA
ACATAGCAAGCATGCAAGTATCCTAATTACCTGGACTC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.960081
Expected error %
1.06803
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At3g09410.3 Score 65 E Value 2e-11 Identity 17.40% Align. Length 143bp (26.58%) Frame 3
68416.m01119 pectinacetylesterase family protein similar to pectinacetylesterase precursor GB:CAA67728 [Vigna radiata]; contains Pfam profile: PF03283 pectinacetylesterase
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At3g09410.1 Score 65 E Value 2e-11 Identity 17.40% Align. Length 143bp (26.58%) Frame 3
68416.m01118 pectinacetylesterase family protein similar to pectinacetylesterase precursor GB:CAA67728 [Vigna radiata]; contains Pfam profile: PF03283 pectinacetylesterase
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0056G15
Clone
Clone name
hba-56g15
LE_HBa0056G15
P056G15
Clone type
BAC
Contamination
none
Estimated length
50,470
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found