Clone Read LE_HBa0056K17_T7_44673

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0056K17_T7_44673
Primer
T7
ID from Seq. Facility
LE_HBa_056_K17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
594 trimmed for vector and quality, 831 raw
Sequence
>LE_HBa0056K17_T7_44673 (raw untrimmed)
AAAATTGGTTTCTGGATGCATTGAAGGTTATTTATCTTTTTGCACATTTAAAACCTCTTCGGACTTCAATCATATTAATAGTCATCCCTCCATGATTCAA
CATAGGGTTACAATTGACATTAGGCAGTCTGGATAGTGACAACCTTTTGATCTATCAAGTCTTGAATTGTATGTTTCAAGTTGATACAATCCTCGTTAAT
ATGCCCAACACCTCCTGAATGGTAAGCACAGTGAATATCGGATCTATAAATCTTGGAGTTGACATTGATAATTTTAGGATCAATTGTCTGTATCAGGCCA
GTTGATTTCAATCTCTAGAAAAGTTATGTTCGGCTTTCAACCAAAGTAGTAAAGACTCTAGAAGGTTTTTTCTCATAATTTGGACGAGGACGATAATGTG
AAGGTACTTGACGGTAGTTTGAAGGATTTTGGTGAGTTGGTGCTTGAATTTGAAAATTTGAATATTGCGGAGCTCAGTAGCTAGGAAGGGTACTTTGGTA
GTATGGTGATGGATTTTGATAACTTGATTAGATATTTGAAAAATTAACTGATGGATCTTGATAATATGGATGAGTATTTTTGTAATTTGTAGGTGTAGTT
TCGTAAACAAGAGATGGAATTTGATAACTCGGTGGTGGAGTTTGCCAACCTGATTGGGTATAAACAAATTGGAATATGAATTTTGTTTGAGCTCCAAGGA
TAACCCTTTGAAGTTGAAGATTTTCTAAGGTATCCTTTTTTCCATCAAAGGGGCAGAAAAATGAAAGACACTTCCCTCTCCCTTTCTTTTTTCCCACATT
TCCAAAAAATTCCACCCCGGGGGCGCCACAC
>LE_HBa0056K17_T7_44673 (trimmed for quality and cloning vector)
CTTTTTGCACATTTAAAACCTCTTCGGACTTCAATCATATTAATAGTCATCCCTCCATGATTCAACATAGGGTTACAATTGACATTAGGCAGTCTGGATA
GTGACAACCTTTTGATCTATCAAGTCTTGAATTGTATGTTTCAAGTTGATACAATCCTCGTTAATATGCCCAACACCTCCTGAATGGTAAGCACAGTGAA
TATCGGATCTATAAATCTTGGAGTTGACATTGATAATTTTAGGATCAATTGTCTGTATCAGGCCAGTTGATTTCAATCTCTAGAAAAGTTATGTTCGGCT
TTCAACCAAAGTAGTAAAGACTCTAGAAGGTTTTTTCTCATAATTTGGACGAGGACGATAATGTGAAGGTACTTGACGGTAGTTTGAAGGATTTTGGTGA
GTTGGTGCTTGAATTTGAAAATTTGAATATTGCGGAGCTCAGTAGCTAGGAAGGGTACTTTGGTAGTATGGTGATGGATTTTGATAACTTGATTAGATAT
TTGAAAAATTAACTGATGGATCTTGATAATATGGATGAGTATTTTTGTAATTTGTAGGTGTAGTTTCGTAAACAAGAGATGGAATTTGATAACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947508
Expected error %
0.419375
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAU89777.1| Score 106 E Value 1e-27 Identity 56.20% Align. Length 348bp (58.59%) Frame 1
gag-pol polyprotein-like [Solanum tuberosum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0056K17
Clone
Clone name
hba-56k17
LE_HBa0056K17
P056K17
Clone type
BAC
Contamination
none
Estimated length
109,287
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found