Clone Read LE_HBa0058G17_SP6_46016

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0058G17_SP6_46016
Primer
SP6
ID from Seq. Facility
LE_HBa_058_G17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
616 trimmed for vector and quality, 915 raw
Sequence
>LE_HBa0058G17_SP6_46016 (raw untrimmed)
AAAGGGATATCACACTAGCTATCGGAGTTANCNTCTCNCTCGATCGTTTCTCTCTCTCCCTTCTTGTTCTTTCTATTTTCTTATTCCAACCCTCTTTCTT
TTACCCTAATTAGTATATAATTAAGACCAAAAGATGGAAATAATACCCCACTAATTAACTTAAGGTTACCTCTTTTAACCCCCAAGAATTCAAGTTATTA
ATATAAACCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCCAACTGGGATTACGCAAGCTGTG
ACGGGCCGTCGCGCCTGCGACGGGCCGTCCTGCTGTCCGTCGCATAGTTCAGAAACTTGATTTTGGGTGAATGGCCTGTGACGGTCCGTCCTGCCACTCC
ATTACGAAGTTCAGAGAGTCGATTTTCGATACCCAATTTCAGATTTTCTAAGTGTTTTGAAATGAGACCCTCGACGGTCCGTCGTGTCCATGACGGTCCG
TCATGGGGTCCGTCGCCTCAGCCTGTTTTTTCAGAAATAAAATCTGCTTCTCAAAATGACTAAACAGGTCGTTACATCATGTTTATGATTAAATTTTTGT
ATGCCTCTATGTCACTATAAATAGAGGCATAAAGATCCTATTATATACACTTGAAGATTTGATGAATGTTTTGAAAAATAAAGAAATGCTCTCATCCTTT
TGCCTCCCTATTTTCTATTGCTTTATTTCCTTGTCCTTATTTTGCCTTTAGTTTTACCAACAGGTATATATTATTATTCTTTACTTCCTATTAATTAGCA
TTTACCCCCACCCATTACCTTTTCCTTCTTTTTTTTAAACCATTTTAAATATTTGAAAAATTTTTTTTTTTATTTCTGTTTTTCAATAACTTTTTAAAAA
TAAAAAAATTTTTTT
>LE_HBa0058G17_SP6_46016 (trimmed for quality and cloning vector)
CGATCGTTTCTCTCTCTCCCTTCTTGTTCTTTCTATTTTCTTATTCCAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGACCAAAAGATGGAAA
TAATACCCCACTAATTAACTTAAGGTTACCTCTTTTAACCCCCAAGAATTCAAGTTATTAATATAAACCCACGAACTTTATAATTAAGGCAAGAATAGTC
AAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCCAACTGGGATTACGCAAGCTGTGACGGGCCGTCGCGCCTGCGACGGGCCGTCCTGCTGTCCGT
CGCATAGTTCAGAAACTTGATTTTGGGTGAATGGCCTGTGACGGTCCGTCCTGCCACTCCATTACGAAGTTCAGAGAGTCGATTTTCGATACCCAATTTC
AGATTTTCTAAGTGTTTTGAAATGAGACCCTCGACGGTCCGTCGTGTCCATGACGGTCCGTCATGGGGTCCGTCGCCTCAGCCTGTTTTTTCAGAAATAA
AATCTGCTTCTCAAAATGACTAAACAGGTCGTTACATCATGTTTATGATTAAATTTTTGTATGCCTCTATGTCACTATAAATAGAGGCATAAAGATCCTA
TTATATACACTTGAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.97157
Expected error %
0.183866
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0058G17
Clone
Clone name
hba-58g17
LE_HBa0058G17
C08HBa0058G17
P058G17
Clone type
BAC
Contamination
none
Estimated length
109,165
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found