Clone Read LE_HBa0058J10_SP6_46146

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0058J10_SP6_46146
Primer
SP6
ID from Seq. Facility
LE_HBa_058_J10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
690 trimmed for vector and quality, 898 raw
Sequence
>LE_HBa0058J10_SP6_46146 (raw untrimmed)
AAATGGGTTTCTNNTTTCTATGTAACANCNNAANANNANNATTTCCCACAACTCATATGTCTGAAACATCTCCATTTAAAGTAGAATGAATTCACATTAA
GCACACGGTACAGTACATAACAGAGAGAGTAGTGTTCTTGAAGCATTATGAACAGCTCTAGACGCAAGCAGAAAACCAACACCCCATTAAACAACTCTAA
AATCTTGAATTGGAAGAGATATTTACCAGTAAAAACAAAATCTCAGTTAAAAGTCACGCAACAAAAAAGAAAACCATGTCTATACAAACAGGACAAAGGA
CAATACAGCAAAAAAAAAAAAACAGATTATCCAGTAGTTTAATTTTTATTAAATTGCTTATAATTGGAAAGAAAAGAAAAAGAAGGCGCTACATTCTTCT
GTCCTTTGACCCAAAACCCGAAAATTTGATTGATTATTTTTATCTCAAATAAAAAAGGTTCCATTTGGGTCGCCATCAGAAACAGTAATCAGTTGGGTAA
AATGTGAAAAAGAGCTAGCAAATAACAAGAAAACTGAAAACCAACCAAATCCGGTAAAAATTAGCGAAACACTGGAGAACAAACACAGAAAGCAACATAC
AGGCAACGGAAGAGAAAAATTTTATCAAAGGCGGAAATGTAAATTGGAAAAAGAAAGTAAAGATCTCTAACTAACCAGGGTCACATTGATGATAAAAATC
CTCCACCTCTGCAAAAGCAAGAGAAAAATGATGAAATGTAGCATAAACTTACAAAACAGAGCAGCCAAACAGGAAATTGGTCGATACCAGTGGTGAGGGC
TTTGATTATGCCGGGTTCGACGGGCCGGTAAAATTCCTTTAAAAACTTTCTTCCCCGGGGGGGGAAGGATTGGTTACTGGTGGCCCCCCCCCTTTCCG
>LE_HBa0058J10_SP6_46146 (trimmed for quality and cloning vector)
AACTCATATGTCTGAAACATCTCCATTTAAAGTAGAATGAATTCACATTAAGCACACGGTACAGTACATAACAGAGAGAGTAGTGTTCTTGAAGCATTAT
GAACAGCTCTAGACGCAAGCAGAAAACCAACACCCCATTAAACAACTCTAAAATCTTGAATTGGAAGAGATATTTACCAGTAAAAACAAAATCTCAGTTA
AAAGTCACGCAACAAAAAAGAAAACCATGTCTATACAAACAGGACAAAGGACAATACAGCAAAAAAAAAAAAACAGATTATCCAGTAGTTTAATTTTTAT
TAAATTGCTTATAATTGGAAAGAAAAGAAAAAGAAGGCGCTACATTCTTCTGTCCTTTGACCCAAAACCCGAAAATTTGATTGATTATTTTTATCTCAAA
TAAAAAAGGTTCCATTTGGGTCGCCATCAGAAACAGTAATCAGTTGGGTAAAATGTGAAAAAGAGCTAGCAAATAACAAGAAAACTGAAAACCAACCAAA
TCCGGTAAAAATTAGCGAAACACTGGAGAACAAACACAGAAAGCAACATACAGGCAACGGAAGAGAAAAATTTTATCAAAGGCGGAAATGTAAATTGGAA
AAAGAAAGTAAAGATCTCTAACTAACCAGGGTCACATTGATGATAAAAATCCTCCACCTCTGCAAAAGCAAGAGAAAAATGATGAAATGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.918947
Expected error %
0.152992
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0058J10
Clone
Clone name
hba-58j10
LE_HBa0058J10
P058J10
Clone type
BAC
Contamination
none
Estimated length
98,084
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found