Clone Read LE_HBa0059A05_T7_46473

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0059A05_T7_46473
Primer
T7
ID from Seq. Facility
LE_HBa_059_A05-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 584 raw
Sequence
>LE_HBa0059A05_T7_46473 (raw untrimmed)
CCCCCGCGCCCGGGTACTCAGAGTCACCGCAGCTGCATCTTATAGCCCCTATCAATCTTACCTCCTTTTACTCCTATTTATCTCACCTTCTTCCATACTA
AAAACTCCTTCTACATCAATAACACCCACAAAACTAACATACCACAGACGTCGAATATAGTATGAATACAACTCAACTATCCAAAACACACAAATAATAT
CAATATTATCAATTTTAACTTATATAAAAAGATAATTTAATATAAATACTTCCAGACAGCAAAATATCTACAACCTCCATGAAAATAATAAAAACAATAA
AATAGAAAAGAACAGAAATAAGGATATAAATATAATTGAAAATAAAGATAGAACAATCAATGAAAAATTATAAATAAGATCAACCAGAACGTTATTATTT
CGTGAGGCAATAATTATCTACATTGCTTATTCCTCACATTATATTCACTCATACCCTCTCTGAACACCAACTTCACAGAAATATACGAAAGAATGAAGGA
AATAGTGAAAAAATCAATATAATCAGATAAAAGCAAAACTATAGAATAAGGTATAAAAATCTTATCAAGAAAATAGAAGAATTA
>LE_HBa0059A05_T7_46473 (trimmed for quality and cloning vector)
TTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.898483
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0059A05
Clone
Clone name
hba-59a5
LE_HBa0059A05
C12HBa0059A05
P059A05
Clone type
BAC
Contamination
none
Estimated length
97,922
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found