Clone Read LE_HBa0061A04_SP6_47238

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0061A04_SP6_47238
Primer
SP6
ID from Seq. Facility
LE_HBa_061_A04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
650 trimmed for vector and quality, 794 raw
Sequence
>LE_HBa0061A04_SP6_47238 (raw untrimmed)
CGAACCTAGAGGATGATGAACCACAATACCAAGCCTGCTTCTTTTGATATGTATTTTCTGGATAGCCGTAGGCTAAACCTCTAATCGGTTTAGATGCACT
TTGTTTCCAAGGATTCTCACTTTCTTCTTTGGTAATGATCTGTCTCGGTTCTCAAGAGGTAGAGTACTACGATCTATCATATAATTTAAACAAAGAACTC
TATCGAATAAGAATGTAATATATACGAGAAAAAGAACTTTTGTTTAGCTTGAATGGAGTTCTTACATATGTCTCTTGAGCACGTGGATCAATCCATATTT
CTTCTTCTCGGGGATTTGTTCTCTTCCTGACATGAGTAACCTTGAACATCTCTTCTACAGCTACCGGCCTACGCAACTCTTTTTCTTGCAAATAACATAA
ATAAAATTTGATCTCCAAAAACTACTTATCAAAAATTAAAAAAATATATATTCCTAAATTAAGACAGTATTCTTTTCTTTCCTTCCTATTAACTAGGTCA
ATAGCTCCACCAGTGTGCAAAGAGCCTCTCTTTTATGATGTGCGAGCCATCTTCCCAATCTCACTCCTCTTTTTATACTTTTTCATCAGTGCCCAATGTC
CCAGTAACACATCCCATCGAGCTATTACCGTAAACTTAGGAATTCTATTTTTTATCCGACATTCTCTCAATATGCTAGAAAACAACTTTGAAGCCTCAAC
CTTGAAATTCGCTAGAACTTCTTCCTCGTGTTCGGGACCTCATACTAATATTTTCTTTTGATAATTACTAATTTTTATTTCTTAATGATTCCAA
>LE_HBa0061A04_SP6_47238 (trimmed for quality and cloning vector)
CTAGAGGATGATGAACCACAATACCAAGCCTGCTTCTTTTGATATGTATTTTCTGGATAGCCGTAGGCTAAACCTCTAATCGGTTTAGATGCACTTTGTT
TCCAAGGATTCTCACTTTCTTCTTTGGTAATGATCTGTCTCGGTTCTCAAGAGGTAGAGTACTACGATCTATCATATAATTTAAACAAAGAACTCTATCG
AATAAGAATGTAATATATACGAGAAAAAGAACTTTTGTTTAGCTTGAATGGAGTTCTTACATATGTCTCTTGAGCACGTGGATCAATCCATATTTCTTCT
TCTCGGGGATTTGTTCTCTTCCTGACATGAGTAACCTTGAACATCTCTTCTACAGCTACCGGCCTACGCAACTCTTTTTCTTGCAAATAACATAAATAAA
ATTTGATCTCCAAAAACTACTTATCAAAAATTAAAAAAATATATATTCCTAAATTAAGACAGTATTCTTTTCTTTCCTTCCTATTAACTAGGTCAATAGC
TCCACCAGTGTGCAAAGAGCCTCTCTTTTATGATGTGCGAGCCATCTTCCCAATCTCACTCCTCTTTTTATACTTTTTCATCAGTGCCCAATGTCCCAGT
AACACATCCCATCGAGCTATTACCGTAAACTTAGGAATTCTATTTTTTAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957634
Expected error %
0.913354
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0061A04
Clone
Clone name
hba-61a4
LE_HBa0061A04
C07HBa0061A04
P061A04
Clone type
BAC
Contamination
none
Estimated length
122,458
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found