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Clone Read LE_HBa0064I21_SP6_49192

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0064I21_SP6_49192
Primer
SP6
ID from Seq. Facility
LE_HBa_064_I21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
672 trimmed for vector and quality, 815 raw
Sequence
>LE_HBa0064I21_SP6_49192 (raw untrimmed)
CCCCTCTAACCAAATTGGAATNNTAAATAATNGGACTTGATTNGATCCAACACATGGCATGCAAGATAAGCTTTTTCTAATGACATGTTCAGTATTTTAT
ATAATTTAATTTTGGCACATAATATAAGTGTGAACGTAACTTTGGATAATTGCGCACAACTCGGAGATAAAAGTAGGAGAATAAATTCATTTAAATAAAA
GAGATCTCGATAAAATCATTTCTTGATTTGTTCGTGTCATTTTTATACTAAGCATCTATTTTTTTTTCTTCTATAAGTTTGAAATACCATACTTCTATAA
AAGTTGGTTATACTATTGCTCCACTTTGGCAACATTAGGGCCCATTTCTAACCATGCAAACCACTTCTACAAAAACATTTTAGCGAATAATAATATTCTC
TTCGTTCACAATTGTTTAACAGGTATATTAAAAATAAATATTTAAAATTAATTGTCAATTTAAATAATTTTTTTTTTCAATTCTACCCTTAATAATTATT
CCATTTTGTTCAATTGAAAAGTTATGTAGACTTTTGATACTCTTGATATAGTAGAGTTATATTAGTCAAATTACACCTTGTATTAAATTTTCCTTGAGAG
AGTGCTTGATCTTATCCTGACAAACAATTATGGATGAAACGAGGATATGAAATGAGAAAATTAGAATTTTAATTCACTGGGTTCAGAATTTTATAAGAAT
AATTTTAAGTAATAATAATTGAATCTATATTTAATATTTAATGTGTGTATATATTAAATAAATTTAATAACATGAATATATTATTTAAAATAAATTCTAT
TAAAATTTGACCAAA
>LE_HBa0064I21_SP6_49192 (trimmed for quality and cloning vector)
ATGCAAGATAAGCTTTTTCTAATGACATGTTCAGTATTTTATATAATTTAATTTTGGCACATAATATAAGTGTGAACGTAACTTTGGATAATTGCGCACA
ACTCGGAGATAAAAGTAGGAGAATAAATTCATTTAAATAAAAGAGATCTCGATAAAATCATTTCTTGATTTGTTCGTGTCATTTTTATACTAAGCATCTA
TTTTTTTTTCTTCTATAAGTTTGAAATACCATACTTCTATAAAAGTTGGTTATACTATTGCTCCACTTTGGCAACATTAGGGCCCATTTCTAACCATGCA
AACCACTTCTACAAAAACATTTTAGCGAATAATAATATTCTCTTCGTTCACAATTGTTTAACAGGTATATTAAAAATAAATATTTAAAATTAATTGTCAA
TTTAAATAATTTTTTTTTTCAATTCTACCCTTAATAATTATTCCATTTTGTTCAATTGAAAAGTTATGTAGACTTTTGATACTCTTGATATAGTAGAGTT
ATATTAGTCAAATTACACCTTGTATTAAATTTTCCTTGAGAGAGTGCTTGATCTTATCCTGACAAACAATTATGGATGAAACGAGGATATGAAATGAGAA
AATTAGAATTTTAATTCACTGGGTTCAGAATTTTATAAGAATAATTTTAAGTAATAATAATTGAATCTATAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.903485
Expected error %
0.122808
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0064I21
Clone
Clone name
hba-64i21
LE_HBa0064I21
C03HBa0064I21
P064I21
Clone type
BAC
Contamination
none
Estimated length
37,431
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found