Clone Read LE_HBa0064M21_SP6_49384

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0064M21_SP6_49384
Primer
SP6
ID from Seq. Facility
LE_HBa_064_M21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
671 trimmed for vector and quality, 797 raw
Sequence
>LE_HBa0064M21_SP6_49384 (raw untrimmed)
TTTGGGTTTACGAACGAAACCCAAATATNNGATTCGTATTCTGATCCGATGGATGAAATAGACAACTATGAGGAGAGTTTTGATGAGGTTGAGTCTAGTG
AAGAGAGCAGTGGAGACGAGTCCACTAGTGAAGATAGCCGAGATACTGGAGATGAGGATAATGATCCTCTATCCTGGCCAACTTGTGCAAGAGAAATCTC
GGATAAGTCCTATAATCTCACTACGTGTATGGATGAGTTAGGATCTTTTCCATTCAAGATTTCTGTGAGAGCAAGAATGACTTTGTATAATGATTTTAGA
AATGTTTTACTTAATGAAAAAAATTATAATGACTTTAAAGGTAGTTGTTTTGGTCATGTAAGGCATATTTCAGAATTTTACAAGTTTAATGGACAAATGG
TTCATTACATGTTGTTGTTCGTGTCAATCGTGATAAAAGTTGCATGAAATATAATTTTGTGTGAATGATAAGGCTTCATGTTTTGGGCTTAAAAGTGTTT
GCATTGATTATGGTCTGAATTGTGGAGCGTACTCCGCGATATAAAAATATAAAAATTGTTTGACATAGGTGAGAAATTTTACTATGAAGTAATCAAGAAT
AAGAATATTAGTGGTTCGAAGTTGTTGAGTTTGATTAAGGGTTTCAAATTGAATAAGGAGTAGAAGTTCAAGTGCTCTTTAGTTTGGTTCGTCTACTCAA
TATTACTTGCCCACGATCAATCTAAGATTGTAAAATCAAACCATATTAAGATGACCAATGATTTAGAGTTTTTCAAGAGCTATTTTGTAGGGGAAAG
>LE_HBa0064M21_SP6_49384 (trimmed for quality and cloning vector)
TTCGTATTCTGATCCGATGGATGAAATAGACAACTATGAGGAGAGTTTTGATGAGGTTGAGTCTAGTGAAGAGAGCAGTGGAGACGAGTCCACTAGTGAA
GATAGCCGAGATACTGGAGATGAGGATAATGATCCTCTATCCTGGCCAACTTGTGCAAGAGAAATCTCGGATAAGTCCTATAATCTCACTACGTGTATGG
ATGAGTTAGGATCTTTTCCATTCAAGATTTCTGTGAGAGCAAGAATGACTTTGTATAATGATTTTAGAAATGTTTTACTTAATGAAAAAAATTATAATGA
CTTTAAAGGTAGTTGTTTTGGTCATGTAAGGCATATTTCAGAATTTTACAAGTTTAATGGACAAATGGTTCATTACATGTTGTTGTTCGTGTCAATCGTG
ATAAAAGTTGCATGAAATATAATTTTGTGTGAATGATAAGGCTTCATGTTTTGGGCTTAAAAGTGTTTGCATTGATTATGGTCTGAATTGTGGAGCGTAC
TCCGCGATATAAAAATATAAAAATTGTTTGACATAGGTGAGAAATTTTACTATGAAGTAATCAAGAATAAGAATATTAGTGGTTCGAAGTTGTTGAGTTT
GATTAAGGGTTTCAAATTGAATAAGGAGTAGAAGTTCAAGTGCTCTTTAGTTTGGTTCGTCTACTCAATAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.933918
Expected error %
0.239282
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0064M21
Clone
Clone name
hba-64m21
LE_HBa0064M21
C08HBa0064M21
P064M21
Clone type
BAC
Contamination
none
Estimated length
55,333
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found