Clone Read LE_HBa0065L20_SP6_50102

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0065L20_SP6_50102
Primer
SP6
ID from Seq. Facility
LE_HBa_065_L20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
803 trimmed for vector and quality, 888 raw
Sequence
>LE_HBa0065L20_SP6_50102 (raw untrimmed)
GGGGCGAGCGATGNCTCANNTNCCACCACTCGACGGACAACTTCTCTTTGCCTTAACATTTTTGGTTACTTTGTTTTTCTTAAAATTTCATGTGATTTCT
TCAAGTGTGAAGAAATCTTAATATTATTTCTGTTATATTAGTTGTTTTGGCAAAAACAAAAGTTACAGAGATTATGGCACGTGAGAGACAGATCGTGAGA
GAGTAGTTTAATATTAAGAGTTTTAGTTTGGGAATCAGTCAAACTAGGACTCCTTATTACATTAAATAAAAACCTAATTTAATTATCTTAGTAATATGAC
CATTATTCCTTTAAAAATCAGACTATAAAACATAATTAAATCACCAATATGTTGCTTCCATTGGGGCTCGAACTCGGGTGGAGTGACCCTTGTAAAATTG
ACCATTTCGGATTAACCCGAGCCTAATTGGTTCTTTAATTAAATTAACTAATTAAATAATTATTTCCTTAGGGTAATTACTATATTACCCTTGGTCTGAA
AAAGACCATTTTACCCCTGGACCCTCAAACATTAAAATTTCCTCTTTAAAGTCTGGTAAAGACTCTTTCGATGAAATCTTTTTTTTCGAGAGCCCTACAT
GGTTGGTTCCAACCTTACCAAAATCATATAACTCCCCAAGATAGTTGGCTTGGCCGTAGTAAGGGTTCCGAGGTCTGGTTCTACACGTATCAATCCGTGT
GAACCCTGGGTCTAATCGCAATCATTATTGACACCTTAAGCATTTATCTTATTCATTTTTTTAGGGTTGTTACAGAACACATGTTGCCTACTTGAGTATT
TAGTCTCCCATCTTCAGTAAATACATTCTTGTAGTAGAATTCCCTCATTTATGATTCATGCAGTATAGGCACATGTACTGTAAAAAAT
>LE_HBa0065L20_SP6_50102 (trimmed for quality and cloning vector)
ACTCGACGGACAACTTCTCTTTGCCTTAACATTTTTGGTTACTTTGTTTTTCTTAAAATTTCATGTGATTTCTTCAAGTGTGAAGAAATCTTAATATTAT
TTCTGTTATATTAGTTGTTTTGGCAAAAACAAAAGTTACAGAGATTATGGCACGTGAGAGACAGATCGTGAGAGAGTAGTTTAATATTAAGAGTTTTAGT
TTGGGAATCAGTCAAACTAGGACTCCTTATTACATTAAATAAAAACCTAATTTAATTATCTTAGTAATATGACCATTATTCCTTTAAAAATCAGACTATA
AAACATAATTAAATCACCAATATGTTGCTTCCATTGGGGCTCGAACTCGGGTGGAGTGACCCTTGTAAAATTGACCATTTCGGATTAACCCGAGCCTAAT
TGGTTCTTTAATTAAATTAACTAATTAAATAATTATTTCCTTAGGGTAATTACTATATTACCCTTGGTCTGAAAAAGACCATTTTACCCCTGGACCCTCA
AACATTAAAATTTCCTCTTTAAAGTCTGGTAAAGACTCTTTCGATGAAATCTTTTTTTTCGAGAGCCCTACATGGTTGGTTCCAACCTTACCAAAATCAT
ATAACTCCCCAAGATAGTTGGCTTGGCCGTAGTAAGGGTTCCGAGGTCTGGTTCTACACGTATCAATCCGTGTGAACCCTGGGTCTAATCGCAATCATTA
TTGACACCTTAAGCATTTATCTTATTCATTTTTTTAGGGTTGTTACAGAACACATGTTGCCTACTTGAGTATTTAGTCTCCCATCTTCAGTAAATACATT
CTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948381
Expected error %
0.0635786
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0065L20
Clone
Clone name
hba-65l20
LE_HBa0065L20
C01HBa0065L20
P065L20
Clone type
BAC
Contamination
none
Estimated length
84,955
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found