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Clone Read LE_HBa0083M16_SP6_52446

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0083M16_SP6_52446
Primer
SP6
ID from Seq. Facility
LE_HBa_083_M16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
723 trimmed for vector and quality, 851 raw
Sequence
>LE_HBa0083M16_SP6_52446 (raw untrimmed)
TAGATGGTTTNCCNNANGCTATGTGANNCACTNTCATTGTATAAGTTTATTAAATGAATATGAAATGCTTAAGGGGAAAAAAAGTAGAGGTGGACTAAAT
AAAATGTTATGTCATATTTTACTCGCCATATATTAATAGGGTGACTTTTAAAGAACATTTATCAATAGTTTAGTGATTTTTTAATTTCTGATTTACTATC
TTCCATTTTCTTAATCTTCGTGTGTCTTGATTAGCAAGGGTGGAGCTACGTTGCATTGAAGGAGTTCGTCCAAAACTTCTTCGGCAAAAAATTATATTAT
TTATAAATAGTTAAAAATAAGTTTATAATAGATGCCAAACCCCCTTCGACTATCTATTTCTATATATTATAAACCTATTAGTGAAAATTCTGGTTCCGTC
TTTGTTGTTCAGCTAGCCACAAGTATAAATGCTTGATTATAGTCTTGAAGGGAAATTCATAGCTAGTGTATCTATTTATTGCTAATTTTTGAGAGCAGGT
TGTCAAATGTTTTTCAACAAGCTTATATATTTACCTAAACAGTGCAAGTGACCTAAAAGATAGACAAGAGAACCTACCATTACCCAAATTAAATGCAAAA
TGAATATTGCAGCTTTATCCATGGACTCAGTTTGAACTGTGGAAATTACACTCTTCAGCTAGTTTGACCGGTCAAAAAAATTAAAGAAATAAAAGATATT
AAGATTTTGGTGATTTTAAATATATTAAGGCTATTTTGTAGCAATAGAAGCATGTGCTAAAACGTAAACGACTTTACTGATCAGCCGAATAAATACAAAA
ATAATGTAATTTTATTTTACTTGATTACTGGTTTTTACTTTCCATTCCAAT
>LE_HBa0083M16_SP6_52446 (trimmed for quality and cloning vector)
CATTGTATAAGTTTATTAAATGAATATGAAATGCTTAAGGGGAAAAAAAGTAGAGGTGGACTAAATAAAATGTTATGTCATATTTTACTCGCCATATATT
AATAGGGTGACTTTTAAAGAACATTTATCAATAGTTTAGTGATTTTTTAATTTCTGATTTACTATCTTCCATTTTCTTAATCTTCGTGTGTCTTGATTAG
CAAGGGTGGAGCTACGTTGCATTGAAGGAGTTCGTCCAAAACTTCTTCGGCAAAAAATTATATTATTTATAAATAGTTAAAAATAAGTTTATAATAGATG
CCAAACCCCCTTCGACTATCTATTTCTATATATTATAAACCTATTAGTGAAAATTCTGGTTCCGTCTTTGTTGTTCAGCTAGCCACAAGTATAAATGCTT
GATTATAGTCTTGAAGGGAAATTCATAGCTAGTGTATCTATTTATTGCTAATTTTTGAGAGCAGGTTGTCAAATGTTTTTCAACAAGCTTATATATTTAC
CTAAACAGTGCAAGTGACCTAAAAGATAGACAAGAGAACCTACCATTACCCAAATTAAATGCAAAATGAATATTGCAGCTTTATCCATGGACTCAGTTTG
AACTGTGGAAATTACACTCTTCAGCTAGTTTGACCGGTCAAAAAAATTAAAGAAATAAAAGATATTAAGATTTTGGTGATTTTAAATATATTAAGGCTAT
TTTGTAGCAATAGAAGCATGTGC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.93087
Expected error %
0.121087
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0083M16
Clone
Clone name
hba-83m16
LE_HBa0083M16
P083M16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found