Clone Read LE_HBa0002N12_SP6_53254

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0002N12_SP6_53254
Primer
SP6
ID from Seq. Facility
LE_HBa_002_N12-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
705 trimmed for vector and quality, 720 raw
Genbank Accession
DU078745
Sequence
>LE_HBa0002N12_SP6_53254 (raw untrimmed)
CAGGATGGGACTGGGTTGATCTAGTTTATTTGATTCGTAAGAAAATTCAGAATTTGGAGTTACAAATGTTATAATCGATACGGAAAGTGTATAGGTGAAG
ATAGGTCAGATATATAAGGATAAAGCAACACTTGCAGATGTGATGACGACATATAAGATAAAGAACAACTTCAATTGCAAAGTAAAGAGATCTGATCAAC
AAAGGTATGATAGTGTTTGGAATTTATATATATTTACATGCTGATAAAATTAGTACATGAAACATTCCTAATTTGTTACCTATCATAACAATTTTTTACC
TGTGACATGAACAAGTTGTGTGGGTTGTTGTGTATCTGTATTGATCCATGCTGAAGAGTTTTGATTTTTTACGAAGGTAGTAAAAAATCACATCGATGTG
CTATAAAACAAATGAAAACATAATAAGAAATTATATACATCTAAACAAGATAGAGCAATATAATTATTAAATATTGATCATAAATTTTTGCTAATTAAAT
ATTATGATACTTTTACAGAATGTATCATGTTATAATAATATAAGTGTAACTCATACGCATTTGATAATTAGTTTAAGAATTTTACCTCATCAATCCCACA
TTTGCTTGGCTGTGACATGGCATAGAACCAATTCTTATTCATTGGAAAAGCAACAACAAAGTCCATCATTGTAATCCAAAAGAAGAATATTTTGATCTGT
ATTTATTGTCTGATGGGTTC
>LE_HBa0002N12_SP6_53254 (trimmed for quality and cloning vector)
TTGATCTAGTTTATTTGATTCGTAAGAAAATTCAGAATTTGGAGTTACAAATGTTATAATCGATACGGAAAGTGTATAGGTGAAGATAGGTCAGATATAT
AAGGATAAAGCAACACTTGCAGATGTGATGACGACATATAAGATAAAGAACAACTTCAATTGCAAAGTAAAGAGATCTGATCAACAAAGGTATGATAGTG
TTTGGAATTTATATATATTTACATGCTGATAAAATTAGTACATGAAACATTCCTAATTTGTTACCTATCATAACAATTTTTTACCTGTGACATGAACAAG
TTGTGTGGGTTGTTGTGTATCTGTATTGATCCATGCTGAAGAGTTTTGATTTTTTACGAAGGTAGTAAAAAATCACATCGATGTGCTATAAAACAAATGA
AAACATAATAAGAAATTATATACATCTAAACAAGATAGAGCAATATAATTATTAAATATTGATCATAAATTTTTGCTAATTAAATATTATGATACTTTTA
CAGAATGTATCATGTTATAATAATATAAGTGTAACTCATACGCATTTGATAATTAGTTTAAGAATTTTACCTCATCAATCCCACATTTGCTTGGCTGTGA
CATGGCATAGAACCAATTCTTATTCATTGGAAAAGCAACAACAAAGTCCATCATTGTAATCCAAAAGAAGAATATTTTGATCTGTATTTATTGTCTGATG
GGTTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.921643
Expected error %
0.0727389
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0002N12
Clone
Clone name
hba-2n12
LE_HBa0002N12
P002N12
Clone type
BAC
Contamination
none
Estimated length
114,298
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found