Clone Read LE_HBa0002P13_T7_53353

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0002P13_T7_53353
Primer
T7
ID from Seq. Facility
LE_HBa_002_P13-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
717 trimmed for vector and quality, 801 raw
Genbank Accession
DU078832
Sequence
>LE_HBa0002P13_T7_53353 (raw untrimmed)
ACTGGGTACCGCGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTACCTCGCTTACCAAACCGCATCACCCCTTTCATGGGTGAAACCTTCAGCAA
GACTTGTTCACCCTCCATAAAATCCAAGTCCTTAACCTTTCGATCTACATATTCTTTCTGCCTATTCTGAGCTGCTAGAAGTTTCTCCTGAATAAATTTT
ACTTTATCTAACGATTCCCTCAAGAGATCAGTACCCCATGGTCTTACCTCAAATGCATCAAACCAACCAGTAGGAGACCTACATCTCCTCCCATACAGTG
CCTCAAATGGGGCAATAGCAATACTTGAGTGATAACTATTATTGTATGAGAACTCTGATAAGGGTAAGAAGTTATCTCAATGACCACCAAATTCTATCAC
ACACGCACGAAGCATACCTTCTATTACTTGAATCATTCGCTTAGACTGACCATCGGTCTGAGGGTGCAATGCAGTACTAAGATCAAACCTAATCCCTAAT
TCAGCATGCAATGTTCTCCAAAACTTAGAAGTGAATTGTGTACCTCTATCTGATATGATGGAAAGTGGATTTCCATGCAATCGAACATTTTCTGATATAT
AGAGTTTGGCTAACTTCTCTGCATTGTAGGTCACCTTGACCGGAATGAAGTAAGCAGACTTAGTTAATCTGTCAACAATTACCCAAATGGAGTCATACTT
ACCCAATGTCTTTTGGAAAGACCAACTACGAAGTCCATTGCAATTCTCTCCCACTTCTATTCAGGAATGGGCATTCCCTGAAGTGTCCCTCCAGGCCCTT
G
>LE_HBa0002P13_T7_53353 (trimmed for quality and cloning vector)
AGCTTACCTCGCTTACCAAACCGCATCACCCCTTTCATGGGTGAAACCTTCAGCAAGACTTGTTCACCCTCCATAAAATCCAAGTCCTTAACCTTTCGAT
CTACATATTCTTTCTGCCTATTCTGAGCTGCTAGAAGTTTCTCCTGAATAAATTTTACTTTATCTAACGATTCCCTCAAGAGATCAGTACCCCATGGTCT
TACCTCAAATGCATCAAACCAACCAGTAGGAGACCTACATCTCCTCCCATACAGTGCCTCAAATGGGGCAATAGCAATACTTGAGTGATAACTATTATTG
TATGAGAACTCTGATAAGGGTAAGAAGTTATCTCAATGACCACCAAATTCTATCACACACGCACGAAGCATACCTTCTATTACTTGAATCATTCGCTTAG
ACTGACCATCGGTCTGAGGGTGCAATGCAGTACTAAGATCAAACCTAATCCCTAATTCAGCATGCAATGTTCTCCAAAACTTAGAAGTGAATTGTGTACC
TCTATCTGATATGATGGAAAGTGGATTTCCATGCAATCGAACATTTTCTGATATATAGAGTTTGGCTAACTTCTCTGCATTGTAGGTCACCTTGACCGGA
ATGAAGTAAGCAGACTTAGTTAATCTGTCAACAATTACCCAAATGGAGTCATACTTACCCAATGTCTTTTGGAAAGACCAACTACGAAGTCCATTGCAAT
TCTCTCCCACTTCTATT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.965007
Expected error %
0.357258
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT66771.1| Score 305 E Value 3e-84 Identity 67.10% Align. Length 709bp (98.88%) Frame 1
putative polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38745.1| Score 299 E Value 3e-82 Identity 68.40% Align. Length 688bp (95.96%) Frame 1
putative polyprotein, 3'-partial [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0002P13
Clone
Clone name
hba-2p13
LE_HBa0002P13
C01HBa0002P13
P002P13
Clone type
BAC
Contamination
none
Estimated length
109,820
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found