Clone Read LE_HBa0003P15_SP6_54124

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0003P15_SP6_54124
Primer
SP6
ID from Seq. Facility
LE_HBa_003_P15-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
628 trimmed for vector and quality, 791 raw
Genbank Accession
DU079465
Sequence
>LE_HBa0003P15_SP6_54124 (raw untrimmed)
CCAGTTTTGCCCTCTCTATGCCCTTCCCTACGAATAGTGAATGGAACTAAAGTCTGTAGGTGGCTTTTTCTGCTGTATTCCTTCAGTTGTCTCCTAACTC
CCACGTCCTAACTTATTTCATGTAAACAAGATTAAAACACATTAATGCCACTAAAAAATGTCCCTACACAACACAACTCTTAAGTGAAATGTATTAAAAA
TATTGTAAACGCACGATATATCAAAACCCTAAACTTAAATTCGTTGTTTGTCCTCAAGAAACACACTAAGACTCTAAACAACTCTTGTATAGAATCAAAC
AATCAAACACTAGCAATCACATGGCTTTCCATTACGAATCTCTTTTCAAGTGCAAATATTTTCTCTCACGCTCAACAAGCTAACTCATGCGTATCAATAT
ATGACAAAGATCGACTAATAGACTCACAATACCCATTGTTTTACTATCACCAAAGTACGAACTTTCCAACAAGGCCACTAGTGCCCTTATTTCAAACGAA
ATCCCTTTTTCAATCAATGAATGTAAATTTTAGTACAAGGATTCTTTCAAAAGTCATGCTCAGAAGTAACTTCAAGTACAATATGTGCTCAATACCATAG
GCTTGCTGTTATTTTCACTACTCAGACTCTCTAAACTAGATCCTAGGATAACTATATGACTTTCTTGGCTTGCAACGTACGCTCAGGGTCTGGTGTGATA
CATTTTTGGGGTACTTTTTATCCACTTTCTTCCTCCTTGAACTTACACTTCTATTTTTTAACATTCTTTTTGCCCTTATTTTTTACCTTCT
>LE_HBa0003P15_SP6_54124 (trimmed for quality and cloning vector)
TATGCCCTTCCCTACGAATAGTGAATGGAACTAAAGTCTGTAGGTGGCTTTTTCTGCTGTATTCCTTCAGTTGTCTCCTAACTCCCACGTCCTAACTTAT
TTCATGTAAACAAGATTAAAACACATTAATGCCACTAAAAAATGTCCCTACACAACACAACTCTTAAGTGAAATGTATTAAAAATATTGTAAACGCACGA
TATATCAAAACCCTAAACTTAAATTCGTTGTTTGTCCTCAAGAAACACACTAAGACTCTAAACAACTCTTGTATAGAATCAAACAATCAAACACTAGCAA
TCACATGGCTTTCCATTACGAATCTCTTTTCAAGTGCAAATATTTTCTCTCACGCTCAACAAGCTAACTCATGCGTATCAATATATGACAAAGATCGACT
AATAGACTCACAATACCCATTGTTTTACTATCACCAAAGTACGAACTTTCCAACAAGGCCACTAGTGCCCTTATTTCAAACGAAATCCCTTTTTCAATCA
ATGAATGTAAATTTTAGTACAAGGATTCTTTCAAAAGTCATGCTCAGAAGTAACTTCAAGTACAATATGTGCTCAATACCATAGGCTTGCTGTTATTTTC
ACTACTCAGACTCTCTAAACTAGATCCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947041
Expected error %
0.264939
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0003P15
Clone
Clone name
hba-3p15
LE_HBa0003P15
P003P15
Clone type
BAC
Contamination
none
Estimated length
117,954
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found