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Clone Read LE_HBa0074J06_T7_55355

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0074J06_T7_55355
Primer
T7
ID from Seq. Facility
LE_HBa_074_J06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
856 trimmed for vector and quality, 904 raw
Genbank Accession
DU079999
Sequence
>LE_HBa0074J06_T7_55355 (raw untrimmed)
CTTTTCCTGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGGCACTCCTCAAGGAACATGCGGGAGCTTTATCCATGGTCGATGCA
GTAGCAGCAATGCTCTTTCAATTGTAAAGAAGGTTAGATCCATTTTATTTGATCTTAAGTATCCTAGTTTTTTGAGTTTCATGCCTGTATTATCAGGTGT
GTGAGTTTTAAACTAAACTATCACCAAATATTTATCGAAACACACCTCAACTATTAGTTGTTCTCTTTTCCTACCTGAACGGTGGTGATAGTCCAGGTAG
GAAAAGGGGGCAACTGATAGTTGAAGTGTGTTTTGAGAAATAGTTGATGATCATTCAAGTAGGAAAAGTGAACATCTAATAGTCCGAGTGGGAAACTCAA
AATAACTGGGATACTTTAAGTGTGTTTTTGACCTGTCACTCTATAAAAGAATTCAACCATCTTTGCAGGCTTGCATTGGATCAAAAAGCTGTAGTCTTGG
AGTTTCAATAAATGCATTTGGTGATCCATGTAAAGGAGTCGCAAAAAGTTTAGCTGTAGAAGCTTCTTGTACATGATGCCTCACGAAACTAATGAACCGA
GAAGGCACGTTCCTTAAGTGTTAAAGTAGTATAAGGTCAGATAAACCATTACTAAGTTACAGCTTCAGAAAGATAGTGCTTAGCTACATATACATCATGG
AGAGGAAGACCACTTTTGGCTTCCCTCACCGATTTGATGAAATTATAATAAAAGAAAACTAGCTTCAATACTTTTGCTTTGCTCTCCCACTTGATGAGAT
TATAGTTAAGAAAAAGTTTGCCTCATGGATGTTTTAATCCAGCAGAGTATAAGTCCCTTTAATAGAATTGATGGTTCCATATAAACTCCGAAAATTTCTT
CCTA
>LE_HBa0074J06_T7_55355 (trimmed for quality and cloning vector)
AGCTTTGGCACTCCTCAAGGAACATGCGGGAGCTTTATCCATGGTCGATGCAGTAGCAGCAATGCTCTTTCAATTGTAAAGAAGGTTAGATCCATTTTAT
TTGATCTTAAGTATCCTAGTTTTTTGAGTTTCATGCCTGTATTATCAGGTGTGTGAGTTTTAAACTAAACTATCACCAAATATTTATCGAAACACACCTC
AACTATTAGTTGTTCTCTTTTCCTACCTGAACGGTGGTGATAGTCCAGGTAGGAAAAGGGGGCAACTGATAGTTGAAGTGTGTTTTGAGAAATAGTTGAT
GATCATTCAAGTAGGAAAAGTGAACATCTAATAGTCCGAGTGGGAAACTCAAAATAACTGGGATACTTTAAGTGTGTTTTTGACCTGTCACTCTATAAAA
GAATTCAACCATCTTTGCAGGCTTGCATTGGATCAAAAAGCTGTAGTCTTGGAGTTTCAATAAATGCATTTGGTGATCCATGTAAAGGAGTCGCAAAAAG
TTTAGCTGTAGAAGCTTCTTGTACATGATGCCTCACGAAACTAATGAACCGAGAAGGCACGTTCCTTAAGTGTTAAAGTAGTATAAGGTCAGATAAACCA
TTACTAAGTTACAGCTTCAGAAAGATAGTGCTTAGCTACATATACATCATGGAGAGGAAGACCACTTTTGGCTTCCCTCACCGATTTGATGAAATTATAA
TAAAAGAAAACTAGCTTCAATACTTTTGCTTTGCTCTCCCACTTGATGAGATTATAGTTAAGAAAAAGTTTGCCTCATGGATGTTTTAATCCAGCAGAGT
ATAAGTCCCTTTAATAGAATTGATGGTTCCATATAAACTCCGAAAATTTCTTCCTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.959341
Expected error %
1.16458
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF70824.1| Score 75 E Value 2e-12 Identity 32.40% Align. Length 107bp (12.50%) Frame 2
putative beta-galactosidase [Lycopersicon esculentum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0074J06
Clone
Clone name
hba-74j6
LE_HBa0074J06
P074J06
Clone type
BAC
Contamination
none
Estimated length
89,366
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found