Clone Read LE_HBa0124K03_T7_59237

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0124K03_T7_59237
Primer
T7
ID from Seq. Facility
LE_HBa_124_K03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
598 trimmed for vector and quality, 807 raw
Sequence
>LE_HBa0124K03_T7_59237 (raw untrimmed)
CTCAACCGGGTCCCGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGGAAGGTATATTAAGACTCGATGAGGGCGTCGAGGTATTGAATTCTG
CTATAGGTCGCCCCTTAAAGGGGGTTTATTATAAAGAAATAAATTGATTNTAATTTATTGATGATTTAAGGTTATTATTAGGAATTAGGAAAGTNTATTT
GGNTTGGAGTATTGATTTTTTATAATGAATAGGGTGAGGTGGGGAAAGAGGTGTGAGAAATGTAATGAATTTAAAAAATATGATGTGATTTAGTGATATG
GTTATTTAAATTGAATGTGTAGTTTATTTTGATTTGATAATNATGATGTNATATTGTAATTTANTTATTTAAGTTATAAGTTGATTTTTTTGGTATAAAT
ATGAGAATAAGTATATATTTATGAAGTTAAGAAAAAAAAGTAGTGAGATTATGATAAATNTTTGATGATAANATTTTATTGATTGATGNTTTAAAAAAAG
GAAAAAAAAAATAAGAAGAAAAATGATATAGTTAGATAAAGAATTATTAGGTATAAAGAAGAANATAGATGAGATGAGTTTTTTAAAATAATTGAAATGG
AATATTTTTAATGTNTTAGTTTTATGTAATAATNTAAATTTTTGTGAANGTGAATATAATGTGATAGATNTATAATAGATTGATTTAGTTTGTTAAAGGA
TTTTGGAGAAATTGATTTAGGATTTTTTTGAGTTGGAGAGTAATATTTTTATGGAGATTGTTTTTTTGGGGAAAATATTTGTGATTTAAGAATTAATTTA
TGATTGA
>LE_HBa0124K03_T7_59237 (trimmed for quality and cloning vector)
AGCTTTGGAAGGTATATTAAGACTCGATGAGGGCGTCGAGGTATTGAATTCTGCTATAGGTCGCCCCTTAAAGGGGGTTTATTATAAAGAAATAAATTGA
TTNTAATTTATTGATGATTTAAGGTTATTATTAGGAATTAGGAAAGTNTATTTGGNTTGGAGTATTGATTTTTTATAATGAATAGGGTGAGGTGGGGAAA
GAGGTGTGAGAAATGTAATGAATTTAAAAAATATGATGTGATTTAGTGATATGGTTATTTAAATTGAATGTGTAGTTTATTTTGATTTGATAATNATGAT
GTNATATTGTAATTTANTTATTTAAGTTATAAGTTGATTTTTTTGGTATAAATATGAGAATAAGTATATATTTATGAAGTTAAGAAAAAAAAGTAGTGAG
ATTATGATAAATNTTTGATGATAANATTTTATTGATTGATGNTTTAAAAAAAGGAAAAAAAAAATAAGAAGAAAAATGATATAGTTAGATAAAGAATTAT
TAGGTATAAAGAAGAANATAGATGAGATGAGTTTTTTAAAATAATTGAAATGGAATATTTTTAATGTNTTAGTTTTATGTAATAATNTAAATTTTTGT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.855279
Expected error %
8.15397
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0124K03
Clone
Clone name
hba-124k3
LE_HBa0124K03
C08HBa0124K03
P124K03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found