Clone Read LE_HBa0127B18_SP6_59602

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0127B18_SP6_59602
Primer
SP6
ID from Seq. Facility
LE_HBa_127_B18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
591 trimmed for vector and quality, 801 raw
Sequence
>LE_HBa0127B18_SP6_59602 (raw untrimmed)
TTAAAAAAATGTCAATATATTCGCCTTGAATGCGGTAATTGTAGTTGACTAATAAACTAATTCGGGCCTTTCTCTTAATTTTTTCAACAATCCATTTCTG
CAGTTCTTTCAGTCCAATCCGCAGGCTCAATACAATACTTGTGTTTATCTTTAAAAATCCAATACCCACTCTCCATTTCTTATTTTACTTTGAACACACA
GTAATACCCACGCCCATAAGCAATCAGCCCCAAATCAATAGAATAGGTTGTGCAGCAGATGTCAACGAGATCCAGATCGTCTCCACATCCCTCACGCGCG
AAGGGATGAGATCCAGATCATCTCCACATCCCTCACGCGCGAAGGGATGAGCTCCAGATTTCTCGCCTTGAACAAGACACTATCCAAATCATGTCGCCCC
TTTTATTTTCCTTTCACCTTTCTATCTCTGTACGAGTTTTCCAGGAAAAGCAGCAAAGTCCTGGACCTTAATCGCCTAAAGATGATGACGCGTGGCTCCA
AGGGCGATTTTCGTCAATCAAAACCCTCCATCCCATCCTTCAATCTGTTGCAAATTCAGAATCGAGATGGAATATTGCTAGTTTTTTTGTATTTAAATTC
CAAGTTTTGTGGGCCTGAAGTAGTGGGTTTCGATCCGGTTTTCCCAAAGAAACCCCTAATTTTTCCCTTATATAAGATCTTTTCCGTGAGGAAAGCAGGG
GGATTTTTTTGAGGAGATGATTTTTTTGAAAATGAAAAGATTCCAAAAAATTTTGTTTTTTTTCTGCGACGTAATGGTCAAGATATTTTAAGGCAACTTA
A
>LE_HBa0127B18_SP6_59602 (trimmed for quality and cloning vector)
TTTCTGCAGTTCTTTCAGTCCAATCCGCAGGCTCAATACAATACTTGTGTTTATCTTTAAAAATCCAATACCCACTCTCCATTTCTTATTTTACTTTGAA
CACACAGTAATACCCACGCCCATAAGCAATCAGCCCCAAATCAATAGAATAGGTTGTGCAGCAGATGTCAACGAGATCCAGATCGTCTCCACATCCCTCA
CGCGCGAAGGGATGAGATCCAGATCATCTCCACATCCCTCACGCGCGAAGGGATGAGCTCCAGATTTCTCGCCTTGAACAAGACACTATCCAAATCATGT
CGCCCCTTTTATTTTCCTTTCACCTTTCTATCTCTGTACGAGTTTTCCAGGAAAAGCAGCAAAGTCCTGGACCTTAATCGCCTAAAGATGATGACGCGTG
GCTCCAAGGGCGATTTTCGTCAATCAAAACCCTCCATCCCATCCTTCAATCTGTTGCAAATTCAGAATCGAGATGGAATATTGCTAGTTTTTTTGTATTT
AAATTCCAAGTTTTGTGGGCCTGAAGTAGTGGGTTTCGATCCGGTTTTCCCAAAGAAACCCCTAATTTTTCCCTTATATAAGATCTTTTCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.966812
Expected error %
0.32347
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0127B18
Clone
Clone name
hba-127b18
LE_HBa0127B18
P127B18
Clone type
BAC
Contamination
none
Estimated length
113,585
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found