Clone Read LE_HBa0127C09_SP6_59632

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0127C09_SP6_59632
Primer
SP6
ID from Seq. Facility
LE_HBa_127_C09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
713 trimmed for vector and quality, 923 raw
Sequence
>LE_HBa0127C09_SP6_59632 (raw untrimmed)
CGGAGTTTTTAATAGTTCTTACATCATACATGTTTTCTTTATCCCAGTTGCATATTACCACTTGCAAAACAGAGAAAATCTAGTGTCACCCGTTTCACCA
CTTCAGGTTAGTTTGTATGGATTATATACTTCATTCGAAGCCTCTTTCTGTAACCGGAGATTCATGTGAATCCTCGATAACATTTCAGGACTTGACGGGA
AGATAGTGACATGGGATTTGCAGAAACAAGAAGATTTATTGGACTATCTATGAACCATTTTTGAACTGGCATATCATAATTCTGTCCATCTGTATGATGT
AAAAAGTTTTTCTTTGCTAAGACCTTTCTAAGGTATAGTTGGAACAGCTGTAAAATGATTGAACAACTCATGAATTTGTTTAAACATGACATCTCAAAAA
GCTATGCTGAAATTTTACTTATTCCGTATTCGAAAAATAGATTTACATGTTTAATCCCAACTTCTTTTTTTAAATGACAAGGAAAACCTACAGCCGCTAT
CCTTTGGGTGCGGACAGGGTAAAACCTCCGCTTCTATACAATAGCTTGCAAATCACGTAGGAGAGATAACCTGCACTAGACAAGCTTGGTGTGATGAGCT
TAATCCAAAGAAAGCAAGGGGTTTTGAACTTGAGACCTCTAACGTTGAAGTTTCAAGCCCTAATCACTGAGCCGCCCCGAATGATTTTTAATAGTAACTT
TTTAACATGTAGTCCTACTGTTTTACTTGATCTAAGATTATATACCAATTCATAACTTAAAGATTAACCTACTTGGTATGATACTTGGATCATAAACAAA
TACAACTTCTTTCTGTTTGGACATTGCATCTTGTTTGCTTAAATCTGACACCAATTCACTTTTCCGACCCATTGATAAGGTTGAATGAAAAAACTAAGCA
CTTCTTATGATTCCGGAAATTCA
>LE_HBa0127C09_SP6_59632 (trimmed for quality and cloning vector)
TTCTTTATCCCAGTTGCATATTACCACTTGCAAAACAGAGAAAATCTAGTGTCACCCGTTTCACCACTTCAGGTTAGTTTGTATGGATTATATACTTCAT
TCGAAGCCTCTTTCTGTAACCGGAGATTCATGTGAATCCTCGATAACATTTCAGGACTTGACGGGAAGATAGTGACATGGGATTTGCAGAAACAAGAAGA
TTTATTGGACTATCTATGAACCATTTTTGAACTGGCATATCATAATTCTGTCCATCTGTATGATGTAAAAAGTTTTTCTTTGCTAAGACCTTTCTAAGGT
ATAGTTGGAACAGCTGTAAAATGATTGAACAACTCATGAATTTGTTTAAACATGACATCTCAAAAAGCTATGCTGAAATTTTACTTATTCCGTATTCGAA
AAATAGATTTACATGTTTAATCCCAACTTCTTTTTTTAAATGACAAGGAAAACCTACAGCCGCTATCCTTTGGGTGCGGACAGGGTAAAACCTCCGCTTC
TATACAATAGCTTGCAAATCACGTAGGAGAGATAACCTGCACTAGACAAGCTTGGTGTGATGAGCTTAATCCAAAGAAAGCAAGGGGTTTTGAACTTGAG
ACCTCTAACGTTGAAGTTTCAAGCCCTAATCACTGAGCCGCCCCGAATGATTTTTAATAGTAACTTTTTAACATGTAGTCCTACTGTTTTACTTGATCTA
AGATTATATACCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.967259
Expected error %
0.116577
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0127C09
Clone
Clone name
hba-127c9
LE_HBa0127C09
P127C09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found