Clone Read LE_HBa0127K18_SP6_60034

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0127K18_SP6_60034
Primer
SP6
ID from Seq. Facility
LE_HBa_127_K18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
756 trimmed for vector and quality, 911 raw
Sequence
>LE_HBa0127K18_SP6_60034 (raw untrimmed)
AAGGATTTAATACTCTCCATGTCTTCTCAAGCATCTCGAATTGTTACCATAGCCCAATGGTACGCAGCTTCACCCTTAATATATTTCCCCTATAATTTTG
TGTCATTCAATTACCCTTTAGAAGTAAAATACTTTTACAAATAATTTATTATTGTAAACTACAAACCTTGGTATAATCCCATAAATCGTTTTTAGTGTCC
ATGCTCCTCCAATCCAATATATCAAATGGGCAAAGAGTCGCATTTCTAGCCAATGTTCCTAGGAAGCTACTTACCTCTATGACAACATCATCCGTAGGAC
CAACGGGTTGATTTTGACTATTCAGTATGATCAACTTACGTTCTTTTCGGGCATGAACATCATGCATTTGCGTTCTACCTCTTTTATTTGGAGTGGAAAC
ATCTCCAGCTATAAGAAAATACAAGAATAATAATTAAAAATTATGAATACATAAAATAAGTTTGTAATCTTATATGTTACCTTGTTCTTCAGGTTGATCA
TTTGTTCGAGGAGTGACAAAATTCATTTGCACTTGATCCTCGAAAGGAAAATCTTTTCCATGCTGGTCAAGAGGCAGCTCCTCGACAGGCTGCACAAGAG
GCAGCTCCTCGACAGGCTGCACAACAGGCAGCTCCTCGACAGGCTGATTTTCAAAAGGCAACTCCTCGATAGATTGTCTTTTTGCTTCAGATTGTGGTGC
TACTGATTGTTCTGCTCCAATTAATTTGAGCAGATGTCCTTTCTTGCACTCTATTTCTTTAATAATTTCATTTGTTGTCAAAAACCGTCCGTTCTTATTT
GCCAAGAATGATAACGATCCCGGTTTAGCAAATGTTTTCTTTTTGGCTTTTTGGTTCATTTTGAATTTCTTGTTGACTCGACCTTAACTATTCAAACCTA
CCTGAAAAAAA
>LE_HBa0127K18_SP6_60034 (trimmed for quality and cloning vector)
TCTTCTCAAGCATCTCGAATTGTTACCATAGCCCAATGGTACGCAGCTTCACCCTTAATATATTTCCCCTATAATTTTGTGTCATTCAATTACCCTTTAG
AAGTAAAATACTTTTACAAATAATTTATTATTGTAAACTACAAACCTTGGTATAATCCCATAAATCGTTTTTAGTGTCCATGCTCCTCCAATCCAATATA
TCAAATGGGCAAAGAGTCGCATTTCTAGCCAATGTTCCTAGGAAGCTACTTACCTCTATGACAACATCATCCGTAGGACCAACGGGTTGATTTTGACTAT
TCAGTATGATCAACTTACGTTCTTTTCGGGCATGAACATCATGCATTTGCGTTCTACCTCTTTTATTTGGAGTGGAAACATCTCCAGCTATAAGAAAATA
CAAGAATAATAATTAAAAATTATGAATACATAAAATAAGTTTGTAATCTTATATGTTACCTTGTTCTTCAGGTTGATCATTTGTTCGAGGAGTGACAAAA
TTCATTTGCACTTGATCCTCGAAAGGAAAATCTTTTCCATGCTGGTCAAGAGGCAGCTCCTCGACAGGCTGCACAAGAGGCAGCTCCTCGACAGGCTGCA
CAACAGGCAGCTCCTCGACAGGCTGATTTTCAAAAGGCAACTCCTCGATAGATTGTCTTTTTGCTTCAGATTGTGGTGCTACTGATTGTTCTGCTCCAAT
TAATTTGAGCAGATGTCCTTTCTTGCACTCTATTTCTTTAATAATTTCATTTGTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957232
Expected error %
0.284453
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0127K18
Clone
Clone name
hba-127k18
LE_HBa0127K18
C03HBa0127K18
P127K18
Clone type
BAC
Contamination
none
Estimated length
117,157
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found