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Clone Read LE_HBa0134B02_T7_60339

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0134B02_T7_60339
Primer
T7
ID from Seq. Facility
LE_HBa_134_B02-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
374 trimmed for vector and quality, 857 raw
Sequence
>LE_HBa0134B02_T7_60339 (raw untrimmed)
TCTTACCTGGCACCCGGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGATTCTGCTGTTGAGCTTGACCCATAGGTTGAGAATACGAAAGGA
TTAAGCACAATTTCCAGTCGCTTTTGTGTGGACTCCGAGCCAATTCTCAGCGCATAAGTGGATTCAGATAAAGGCTATATGAATAAGATCAAAGATCTGA
ACTAAAAGTTCGATAATGAGCGGATAGTTACCCGCCCATATACTCAGCGATGATCGTCGGGTGACATGTGCTCTGCCTGATTGGCTGCCAGCTACATCAT
CATCAAAACTTACAGGCCCCCACAGATAACTCATGTGCTGTACGCCATGCTCCTGAACCCCCACTGTTGATGTGGCCTAAACCTCCTGAAAAGATTTATG
GAGGAAGCATTCTAACTTATGTGTCTGTGCTCGGGTATTTCTGCGGACCACATTCTATCTCCATCGTTCACGATGCGCTTTATACTCTGCTTTAGCAGCG
CCCCCGACAATTTGGTATACATGGTGTAACCTTGTCTTAAAACCGGTCGTCCCACCTGGAGGACATGTAGACTCTTCTATAAATCCTATTCACCGTAAAA
TCCGCCTTCCTTCCATTTGGCTTCTTTGGCCCACGTTTTCTCTGTCCTCAGTCTCAACCCCATTCCCTTCTCATCCCAAAACCCACCTCTATCTTCGTTG
CCTTACCCGTAAATAATTTTCTCCTCCTCCTCGTTCCCAAGCCCCTCCTGGTGTTCCCTACCCTCACGGATCCCAATTGCCCTCCTCTCCGCCGCGCTTC
ATCCCCTCCTCACCGCCCTTACTCTCTTCCCATGTGGCCTCCGAAACCTCCCCGCTA
>LE_HBa0134B02_T7_60339 (trimmed for quality and cloning vector)
AGCTTGATTCTGCTGTTGAGCTTGACCCATAGGTTGAGAATACGAAAGGATTAAGCACAATTTCCAGTCGCTTTTGTGTGGACTCCGAGCCAATTCTCAG
CGCATAAGTGGATTCAGATAAAGGCTATATGAATAAGATCAAAGATCTGAACTAAAAGTTCGATAATGAGCGGATAGTTACCCGCCCATATACTCAGCGA
TGATCGTCGGGTGACATGTGCTCTGCCTGATTGGCTGCCAGCTACATCATCATCAAAACTTACAGGCCCCCACAGATAACTCATGTGCTGTACGCCATGC
TCCTGAACCCCCACTGTTGATGTGGCCTAAACCTCCTGAAAAGATTTATGGAGGAAGCATTCTAACTTATGTGT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.981158
Expected error %
7.565
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0134B02
Clone
Clone name
hba-134b2
LE_HBa0134B02
P134B02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found