Clone Read LE_HBa0134D24_SP6_60478

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0134D24_SP6_60478
Primer
SP6
ID from Seq. Facility
LE_HBa_134_D24-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 751 raw
Sequence
>LE_HBa0134D24_SP6_60478 (raw untrimmed)
CCCCCTCTTCCTAAATAAAAAAGGGGGTTGGGAGGTTGTGAGGGGATAATAAAAGAAAAATTCTTAAAAAGAGGCCGCGGGTGTTCGCCTTCTCTGTGCN
GTTTTGTTCCTCCCGTTNTCTCGTCTGTTGCTCTTTTGCCCCCAAAGAGTCNCGCCGTTTTGTCCTNCCTTTCGGTCTGTGGCTTTCTGTTGTCGGGTCG
GGGTCTTCTTTCTTGCTCTCTCTTCGTGGTGGTGTCTGTTGTTTCTGCTTCTCCTGCCCCTTGTNNTTGTGTCTTGTGGGGTGTTTCTCGTGCTTCCGTG
CTGTGCTCGGGGTTTTGTCCCGTGTTTCGTTTGCTCTCTTTCTCTCCTTGTTTTTTTGCGCTGTGTTTCTTTCCTTGTCCCCTTCCCCCCCCCTGCGCCT
GTGTGTGCCCGCCTCGCCTTCTCCCCCCTCCTCCCCCTTCTTCTTGCGTCTGTGCCTGTGCGGTGTGGTGCGNGGCGTGCGTGGGGTGGGGGCGCCTGTG
TCGGGCTGGGTTGTGGCTTCTCGTCTCCTCCTTGTTGCGCGGGCGCTCTCTCGTGGCCTGTGGCTTCGCTGTTGCGTTCCTTTTTTTGTCGTGCGCCCGC
GCCCTGTCGGGGTCTGTGTTCGTGTCTGCTTGCTCGTCCTCCCTGNTTGCTGTGCTCGTGCGCGTTTTCCTCTCTTCCGTCTTTCTTTCCCCTGTTGCCC
GTCCCGGTGTGGGGCGTCTGGCGCGGTGCCCTTGCTCCTGTTGGGTCCTCC
>LE_HBa0134D24_SP6_60478 (trimmed for quality and cloning vector)
TTTCTTGC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.92171
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0134D24
Clone
Clone name
hba-134d24
LE_HBa0134D24
P134D24
Clone type
BAC
Contamination
none
Estimated length
112,956
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found