Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0134F18_SP6_60562

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0134F18_SP6_60562
Primer
SP6
ID from Seq. Facility
LE_HBa_134_F18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
642 trimmed for vector and quality, 856 raw
Genbank Accession
DU072849
Sequence
>LE_HBa0134F18_SP6_60562 (raw untrimmed)
GGGGCAGATTTCGAAATGTAAAAATGATATCATGAACCTTTTCGACAAGGTACTAATATGCTATTTAATAATGGACCTTTAGGGTGGTTGTTATTATTAT
TATTATTATTATATTGCCCTTGTTGAACTTGATTGGGGCAACATGGTTAGTGAGGATTCATATAGCTATTCTCAACTAGCATAGGATTGAGGCGTAGTTC
TATATAGTCAAAAAATCATTTTATCTAAAATAATGTACTTTCTTCAGTCCAATATGGTGTCACCATTTGCTATGCATCAGCAACAACTTGCCCAGCTAGC
TCAACAACAATCTCTTCTTATGGCTGCTGCCGCTGCTAGTGGCAATTTGAAAATCCCTGGGGATGTTCAACAAAGCCCAAATGGCTCCAACATAGTAAAC
CAAAGTTGGCCACATGCAGGCTACCAGTTCCCTGGAATGATGATGCCAGCCAGTGGAAAGACTGAACTGGAGAAATATTTTCAGGTAAAATGTCTGAATT
TTTCAAGTTCTATTGAAATGTGCCCTATAGACTCTGCTAAAAACTGTTTTTCTGTGCTTGTAAACTAGGCGGGAGCAGCACATTCAGCTGGAAACTTTGT
GCCAGTATCGACATCCAGGTACGGACTTCTTATATGTCATTTGAGGACTGTTATAAATTGGTCTCGCAGTGCTCCCCCCCCATGCAACAATATTTTTGGA
AGGCATTATCTGAGGTGAAATACCTGAATATAGGCTCTGTCTATGCAAAAAAAAAAACGTTAATTAGACACAGTCTATCCTCAAGTTTCCACTTCCAATT
CCCTGCCTAGAAGCAGAAAGCGTAAAATAGAAAAACCGTAGCACATTTTCCATGTA
>LE_HBa0134F18_SP6_60562 (trimmed for quality and cloning vector)
GATATCATGAACCTTTTCGACAAGGTACTAATATGCTATTTAATAATGGACCTTTAGGGTGGTTGTTATTATTATTATTATTATTATATTGCCCTTGTTG
AACTTGATTGGGGCAACATGGTTAGTGAGGATTCATATAGCTATTCTCAACTAGCATAGGATTGAGGCGTAGTTCTATATAGTCAAAAAATCATTTTATC
TAAAATAATGTACTTTCTTCAGTCCAATATGGTGTCACCATTTGCTATGCATCAGCAACAACTTGCCCAGCTAGCTCAACAACAATCTCTTCTTATGGCT
GCTGCCGCTGCTAGTGGCAATTTGAAAATCCCTGGGGATGTTCAACAAAGCCCAAATGGCTCCAACATAGTAAACCAAAGTTGGCCACATGCAGGCTACC
AGTTCCCTGGAATGATGATGCCAGCCAGTGGAAAGACTGAACTGGAGAAATATTTTCAGGTAAAATGTCTGAATTTTTCAAGTTCTATTGAAATGTGCCC
TATAGACTCTGCTAAAAACTGTTTTTCTGTGCTTGTAAACTAGGCGGGAGCAGCACATTCAGCTGGAAACTTTGTGCCAGTATCGACATCCAGGTACGGA
CTTCTTATATGTCATTTGAGGACTGTTATAAATTGGTCTCGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.968722
Expected error %
0.177248
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0134F18
Clone
Clone name
hba-134f18
LE_HBa0134F18
P134F18
Clone type
BAC
Contamination
none
Estimated length
110,813
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found