Clone Read LE_HBa0039C03_SP6_61924

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0039C03_SP6_61924
Primer
SP6
ID from Seq. Facility
LE_HBa_039_C03-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
659 trimmed for vector and quality, 797 raw
Genbank Accession
DU071106
Sequence
>LE_HBa0039C03_SP6_61924 (raw untrimmed)
ATACTTTGAAGTATTTTAACTCAAATTATATCTATGTTATTGGCTAACACTCTTAAGCCAATATTCTCTAATATGCCCAACTCAATATTGGGCGTTGAGA
TGCCTATGTACCTTAATACATATTCTTAAAAACCTTTTCACTAAACAAGTACATTTTGGAATGTTACACTTGCCAATGGGACCAGTGCTACAGATGGTGG
AGTAGACCAGGAGGAACTGTGTGCTCTACTAGCGGCATTGGCGGACTCGGTCGGGTGGTATCAGTAGGCTCTGACCCTTGGTCTAACTCTACCGTGTCCA
TCAAGTTCTCATTTATAGGCTATAACTCAACCATGGCCCCTCTCCGCGGTGCCGCTACATTGGCCTCATCCCTAATGAGACCTATATCAATAGTGCCACC
CGGAGTTTGGAGTGTATCACAGTGCCAAATGGGCACTCCGGCATTCCTACATAGATGGAAGATCAGACACGCAAATGGTTAAGTAGTGGAAGATTTGAAA
GCCCTCTCATGTATCACCGTGATCAACAGCTTTGCAAAGTTTATCTCCAAATCTGCCACCAAGGATTCTACCAGCACCGCTCTATCCCAAGTAAGAATAT
TATCTCCAATTGTCATAAATAGGAGGTGGCGGACTAACAACAAGAATAACTTGTCTATGAAAGTGAGGTTGGCCTTTTTGATCCTCCCTTTGGGGTCAAA
CACCCAATCAGCCCCCTCACTGTCAAGCCACCTCTTACCTGCCTCTCTATGCTCCATGGTCCTCTAAAACTGGACCACTTTTGAACATCTCCCCATT
>LE_HBa0039C03_SP6_61924 (trimmed for quality and cloning vector)
AAATTATATCTATGTTATTGGCTAACACTCTTAAGCCAATATTCTCTAATATGCCCAACTCAATATTGGGCGTTGAGATGCCTATGTACCTTAATACATA
TTCTTAAAAACCTTTTCACTAAACAAGTACATTTTGGAATGTTACACTTGCCAATGGGACCAGTGCTACAGATGGTGGAGTAGACCAGGAGGAACTGTGT
GCTCTACTAGCGGCATTGGCGGACTCGGTCGGGTGGTATCAGTAGGCTCTGACCCTTGGTCTAACTCTACCGTGTCCATCAAGTTCTCATTTATAGGCTA
TAACTCAACCATGGCCCCTCTCCGCGGTGCCGCTACATTGGCCTCATCCCTAATGAGACCTATATCAATAGTGCCACCCGGAGTTTGGAGTGTATCACAG
TGCCAAATGGGCACTCCGGCATTCCTACATAGATGGAAGATCAGACACGCAAATGGTTAAGTAGTGGAAGATTTGAAAGCCCTCTCATGTATCACCGTGA
TCAACAGCTTTGCAAAGTTTATCTCCAAATCTGCCACCAAGGATTCTACCAGCACCGCTCTATCCCAAGTAAGAATATTATCTCCAATTGTCATAAATAG
GAGGTGGCGGACTAACAACAAGAATAACTTGTCTATGAAAGTGAGGTTGGCCTTTTTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.983123
Expected error %
0.0366781
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0039C03
Clone
Clone name
hba-39c3
LE_HBa0039C03
P039C03
Clone type
BAC
Contamination
none
Estimated length
55,848
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found