Clone Read LE_HBa0039K05_SP6_62312

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0039K05_SP6_62312
Primer
SP6
ID from Seq. Facility
LE_HBa_039_K05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
403 trimmed for vector and quality, 881 raw
Genbank Accession
Sequence
>LE_HBa0039K05_SP6_62312 (raw untrimmed)
AATATGGAGCTAAGGCTTTCTTTTATGAGTTTCTCCTCTTCATACACCACTCTCGACTTTGTAAGCTAACTCTACCATCGTGGTTTACAACCAATTTTAC
CCTTTGTTTCTATCAAATGTATTCAAACCAATTTTTCCCTTTTGTTCTCAAGTGTTTAAACGCACTAATGAGACTACTGTCCCTCAGCTTTTTTTGTATG
GTTGCTAAGATGAATATATTTGTAAACTAATGAACAATGAAAGCACAAATAACAGATCTGGAAAGGAAAAAAAACCTCTTAAAAAGTTCTGCAATAAAAT
GAAAGGAAGGTTTTTGTCAATGTTTTTTCAGATATGACCTTGCAATAGTTGCATCCATTTATGAGATGACATTCGTGGCACATCTGTCCCTCTTATGGAA
CAAAGGAACTCTTCTCCCTCTTGAAAATGATGACGTACTACTCCCATATTGATAGAGTGACCCTTAATTGCTTATATAATTGTATTCTCGATTAAAATAA
CATAGGCTCAATTCCCTAATGATCCTTATGTATTTTTTTGTTATTATTTTTTATTTTCTTGGTACCTTTTTTTTTATGTGCTATAGATTATTTATTAAAT
TTTTTTTATGAATGTATTCTTTTTTATCATTTTTTCTCTTTGTTATTTTTTTTTCCTCCTATTTTTTTTTTTCATTTCTTTCTCCTATTTTTCGTCATTC
TTTATATATCCAACTAAATTTCTTTCATTTTATTGTTTTAATTTCTTTATTTTTATTCCTTATCTTTCTCTTTCTTCTCTTTACTTTGTTTAGCTCTTTT
TTTTTTATTTTTTATTCATGATTATATAATTTGTTTGTATATTTTTAGATACTTCTTTTGGTAGTATTTACTTTTGATTTT
>LE_HBa0039K05_SP6_62312 (trimmed for quality and cloning vector)
AGTTTCTCCTCTTCATACACCACTCTCGACTTTGTAAGCTAACTCTACCATCGTGGTTTACAACCAATTTTACCCTTTGTTTCTATCAAATGTATTCAAA
CCAATTTTTCCCTTTTGTTCTCAAGTGTTTAAACGCACTAATGAGACTACTGTCCCTCAGCTTTTTTTGTATGGTTGCTAAGATGAATATATTTGTAAAC
TAATGAACAATGAAAGCACAAATAACAGATCTGGAAAGGAAAAAAAACCTCTTAAAAAGTTCTGCAATAAAATGAAAGGAAGGTTTTTGTCAATGTTTTT
TCAGATATGACCTTGCAATAGTTGCATCCATTTATGAGATGACATTCGTGGCACATCTGTCCCTCTTATGGAACAAAGGAACTCTTCTCCCTCTTGAAAA
TGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948001
Expected error %
0.106581
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0039K05
Clone
Clone name
hba-39k5
LE_HBa0039K05
C12HBa0039K05
P039K05
Clone type
BAC
Contamination
none
Estimated length
103,569
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found