Clone Read LE_HBa0012K16_T7_6271

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0012K16_T7_6271
Primer
T7
ID from Seq. Facility
LE_HBa_012_K16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
775 trimmed for vector and quality, 907 raw
Genbank Accession
Sequence
>LE_HBa0012K16_T7_6271 (raw untrimmed)
ACCGGGACCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAGTGAGCTCCAAAAAATACAAAGTGAATCAAAGGAGAAAAGAAGGTTGAAG
AGTTTTTCACTCTATTTTTAAATATTCTAAAGAGTGTTTCTCTTTAATAACGATTTGTTCCTTGGACCTAACAGTTCTTATGAACTACAGGTGGATAATA
TTAACACAGTGGAAGAAGCTGATGCATATAAGGAGTATCTTGTGAGTGCTATGGAACGGGTTCAACGATCTAATGTGAGAATATCTCAAAGCTAATGCAA
TTTTTACTTGTATTTCATAAGGTCTTATCTATATACCCTTATCAAAATGGGGTTGTTGAGAGAAAACATAGACATATACTTGAAGTAACTAGGGCACTCA
AATTGCAGGCACACATTCCTTTGATGTTTTGGGGAGCACTATGTGTTAGTTGCAGTTTATCTAATCAACAGATTACCAAGTAGTGTGATAGGTCATCAAA
CTACTTCTGAGAAGTTATTATATGGAAGCCAACCAGGTATGTCTCATCTTGCTAAGATTCTCACCAGACATGTCAAACTGATGGTAAGATCAAGGCCAAA
TCTTCATATGGGATATTCAGAAGTCTAGAAGGGATATGTTCTTTTTATCTGACCAATAGGACCTTCTTTGTGATAAGACATGTCATCTTCAGGGAAGATG
CATTTCCTTTTGCAAATGAGAGTGGTTCTAATTATCATCCTATATTTGGAGACACTGTACATGGTTCAGGGTAGTTGTCTCAAGCCTTTACTGATTCCAC
TCCTATTCTACTAATTCTGTGATGAGGAAACGGTTTTGTTAGAGGATAGAAGAATATTTTATTCCTTGTCATAAAAAAAACCAAAAACCAGGGAAGTTAA
AAAAAAC
>LE_HBa0012K16_T7_6271 (trimmed for quality and cloning vector)
AGCTTAGTGAGCTCCAAAAAATACAAAGTGAATCAAAGGAGAAAAGAAGGTTGAAGAGTTTTTCACTCTATTTTTAAATATTCTAAAGAGTGTTTCTCTT
TAATAACGATTTGTTCCTTGGACCTAACAGTTCTTATGAACTACAGGTGGATAATATTAACACAGTGGAAGAAGCTGATGCATATAAGGAGTATCTTGTG
AGTGCTATGGAACGGGTTCAACGATCTAATGTGAGAATATCTCAAAGCTAATGCAATTTTTACTTGTATTTCATAAGGTCTTATCTATATACCCTTATCA
AAATGGGGTTGTTGAGAGAAAACATAGACATATACTTGAAGTAACTAGGGCACTCAAATTGCAGGCACACATTCCTTTGATGTTTTGGGGAGCACTATGT
GTTAGTTGCAGTTTATCTAATCAACAGATTACCAAGTAGTGTGATAGGTCATCAAACTACTTCTGAGAAGTTATTATATGGAAGCCAACCAGGTATGTCT
CATCTTGCTAAGATTCTCACCAGACATGTCAAACTGATGGTAAGATCAAGGCCAAATCTTCATATGGGATATTCAGAAGTCTAGAAGGGATATGTTCTTT
TTATCTGACCAATAGGACCTTCTTTGTGATAAGACATGTCATCTTCAGGGAAGATGCATTTCCTTTTGCAAATGAGAGTGGTTCTAATTATCATCCTATA
TTTGGAGACACTGTACATGGTTCAGGGTAGTTGTCTCAAGCCTTTACTGATTCCACTCCTATTCTACTAATTCTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.954163
Expected error %
0.649476
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT40538.1| Score 75 E Value 3e-12 Identity 12.40% Align. Length 452bp (58.32%) Frame 3
hypothetical protein PGEC407.4 [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0012K16
Clone
Clone name
hba-12k16
LE_HBa0012K16
P012K16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found