Clone Read LE_HBa0133P05_SP6_65624

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0133P05_SP6_65624
Primer
SP6
ID from Seq. Facility
LE_HBa_133_P05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
685 trimmed for vector and quality, 954 raw
Sequence
>LE_HBa0133P05_SP6_65624 (raw untrimmed)
TCCCGGGTTTTGTCGATCCTTGTGCTCATTAGGTAGTGAAAAAGATAATCATGCAGCAATTTGTTGTTGTCATCCCCGTTTACCTTTGCAGACTGGGAAT
TGCATTCCATGTGGGTTCTTTGAGACTAGAAGAAATGGCACAATACATGCTCCTTTTATGTTCCTTTATTCAGTATACTATGAACCACATATTTGCTTGT
TTGTGTAGAAATCTACTTTGTTCCTCACACAACATCATAGCTGATATACAATTGTGTTCTTTCTACTAGGAATAACATACTACAGTTTTGCTCATCATCT
GGTGTGCTTGAAGGAAACTGAGGATTTAGTATGGGATAATGATGTGACGATTTTTATGATTGATTTGATGCACAAAGTAAATTACTTCCACAAATTTAAG
CACACGTTGAAATTTTTTGGTAAAAAAGTTCACCCTGCAATTTATAAGTGGTTCTATTTTCAAAGCTCAATATGTGCAGGTTGACTGCTCTTGCATACAT
TTTGTCTCTGTTGGCACTTATGACAATGAGATCAAAGTTTTGTTAATCTAAACCAACTTACGATGTGAGGAATCAGATAACATCTGATTGGAGGCCAATT
TTATGCTTTCGAAGAAATTTTAAGTATTTCTTATTCGAGTCACTTGATTTTTACCAACATAAGGTGGATTCATGTAGAGTCCAAATAGAATGCGTCTGGA
CATCTTGTCCGTGTATTTAAAGATCACAAAAAGTTCTTTGATGGCTTGTCTAAATCTCTTTCTCTTCTAAAATGATGAGAGATTCCTTTGAAATAATAAG
TTGGCAATAGAATGTCCCCTTCTGAGGTATTACTTATCAAACCTATTTTTGTCCAAGCGTTCATCATATCCAAGGTTTCTTCCGCACCTCTACTTAACCT
TCTACATCTTGAAAGGATTTTGCTGGCAGTTAACTTCCAAAAATTCGGAAAAAT
>LE_HBa0133P05_SP6_65624 (trimmed for quality and cloning vector)
ATTAGGTAGTGAAAAAGATAATCATGCAGCAATTTGTTGTTGTCATCCCCGTTTACCTTTGCAGACTGGGAATTGCATTCCATGTGGGTTCTTTGAGACT
AGAAGAAATGGCACAATACATGCTCCTTTTATGTTCCTTTATTCAGTATACTATGAACCACATATTTGCTTGTTTGTGTAGAAATCTACTTTGTTCCTCA
CACAACATCATAGCTGATATACAATTGTGTTCTTTCTACTAGGAATAACATACTACAGTTTTGCTCATCATCTGGTGTGCTTGAAGGAAACTGAGGATTT
AGTATGGGATAATGATGTGACGATTTTTATGATTGATTTGATGCACAAAGTAAATTACTTCCACAAATTTAAGCACACGTTGAAATTTTTTGGTAAAAAA
GTTCACCCTGCAATTTATAAGTGGTTCTATTTTCAAAGCTCAATATGTGCAGGTTGACTGCTCTTGCATACATTTTGTCTCTGTTGGCACTTATGACAAT
GAGATCAAAGTTTTGTTAATCTAAACCAACTTACGATGTGAGGAATCAGATAACATCTGATTGGAGGCCAATTTTATGCTTTCGAAGAAATTTTAAGTAT
TTCTTATTCGAGTCACTTGATTTTTACCAACATAAGGTGGATTCATGTAGAGTCCAAATAGAATGCGTCTGGACATCTTGTCCGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953613
Expected error %
0.223959
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0133P05
Clone
Clone name
hba-133p5
LE_HBa0133P05
P133P05
Clone type
BAC
Contamination
none
Estimated length
95,263
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found