Clone Read LE_HBa0186C09_T7_65777

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0186C09_T7_65777
Primer
T7
ID from Seq. Facility
LE_HBa_186_C09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1126 raw
Sequence
>LE_HBa0186C09_T7_65777 (raw untrimmed)
CTGCTAGCGAGTACTCGCTCGGGGGAGGAGCCTTGCTCTGCGGTGCGACCCTCGCGAGGGCGATTGCATAGCTTCTACCCTGTATCAACAAATAAAGAAG
ATACCCCCCTTTGAAGAAGAGTGATGTGATTAGGTAAACAACTATATTCAAAGAATTAAGCCTATACCCGCTAGAGTATTCTATCTCCCTTCTGCTCTTT
CTCGTCATTAGGTGAGGTTTATATGTATGCATATAGAGATGTCTATCGACGCTTTTTCACTCGCACTCTGGTTCCTAGTAATGCAATGCTTTCTAGCTGT
GTCTTATTACTAGCTCTCTATTTATATNTATACCCTCTTCTCGCTCATTTATTGATAATCATCTGCTAGATAAAGATCTGATTGCATGATAGTACTAAGC
AAATGTGCAAATTACTGTTACGGTGATCATCCCAAACCATACTATAGTGAATATTGTGAGTTGACAGAGTGACAGGCATGCGTGAGCATCAGCTTGGTTG
CGCACTAGTAGATTCCATGTCCTAGGTAGGCTAATATTATCTCAGATATTATAGTATACTATCATACTATAATACTAACTTAGACTTACATATCTCTCCT
GTATATCGCTGAAGATAATTTGACCCATTGGGCTTGGCTGATTGGTGTGATCTATATTATTTGGTCTATTACATTGATTATCTTCGTATTCATTAAGGAT
TTTGTCATCTAGATTATATATTTCCCCTCTCTAATTAGAGTGTCTAAAGTAATGATAGTCTCTACAATTAGACTCGAATGAAATTTTACTGCGTGATTAT
TAAACTCTGGTATATATTCATATTTGATAGTGTTAATTGAAAGATAACTTCTTTGTGATAGTTTTGATATTCACTGATTATCTCCACATATTGACGCCTT
TTCTTGCTATAAATGATTTTTATAATATGGTTGTCACTTAATCCGCTTTTCATATGTCTCCGTCAGTAATCGAAGCTCTTATATAAAACTTGGAAGAATT
TTGTTAGTATATAATTCCATAATCATATTGGACAGGTGTCGCCCGTACACTCTTTTGGTATTTCTCTCACACACCTAATATCCTTCTATTAAAACGTCAA
CCTACTTTTCAGAGCTGTGAACGGAC
>LE_HBa0186C09_T7_65777 (trimmed for quality and cloning vector)
AC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.73925
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0186C09
Clone
Clone name
hba-186c9
LE_HBa0186C09
P186C09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found