Clone Read LE_HBa0186P07_SP6_66396

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0186P07_SP6_66396
Primer
SP6
ID from Seq. Facility
LE_HBa_186_P07-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
247 trimmed for vector and quality, 932 raw
Sequence
>LE_HBa0186P07_SP6_66396 (raw untrimmed)
CCGGCTAATTNGGTATGAATACCGCCTCTTGAGTTAACATGTTGGAGAACTGTATGACTGTCGAGTTGGTTATTCATTTAAAGATGCCCAATACCACACA
TCTGACAGAAACCCAATATAATGACACTAACTGGACGGACCCTCTTCAAGCTGCTGGAGCCCCCCGTACATGATGAATGATGCCTGGCGGTCTCACACCA
TCACTGGCATACTAACTTCCGACTATGATTGAACCCGAGAAGCCACAGACTATGTATTTGGCTACTGCCAAGGGGAGATTGCTCACATCACATGCAGTTT
GTACATTTACTCAACCCCTTTTTATTTCCTTGTTTGAGAGGTATGCGCGACCTTGCCTTTCCCCAAACTCTGTGGTTTACCTCTTCACCTCCCACGGGCC
CAATGTTAAGGGGGAGGGTGTGGCCTAACTGCAGAGTTGGAACCTAAAGTGGGAAAGATAGGGTCAAGTAAAGAGTAATAAAATGAGTCATCTCTCCCAT
AACAAAAAAAAAAAAAAAAAGAAAACCAGAACCACCTAAAAACAAAAAAACAAATAGGTTACACGCGGCCGCAAGCTTATTCCCTTTAGTGAGGGTAAAT
TTTACCTTGGCACTGGCCGCCGTTTTACAACGTCCTGACTGGGAAAACCCTGGCGTTACCCAATTTAAACCCCTTGCAGCACATCCCCCTTTCGCCAGCT
GGCGTAAAAACAAAAAGGCCCCCACCAATCCCCCTTCCTAACAGTTGCGCACCCTGAATGGGAAATGGGACGCCCCTGGTACCGGCCCATTTAAGCGCGG
CCGGGGTGGTGGTAACCCCCACCGGGACCCCTACCCTTGCCAGCGCCCTAACCGCCCCCCCCTTTCCTTTCTTCCCTCCTTTTCCCCCCGTTCCCCGTTT
TCCCCGCAAGTTCAAATCCGGGGGTTCCTTTA
>LE_HBa0186P07_SP6_66396 (trimmed for quality and cloning vector)
TGTATTTGGCTACTGCCAAGGGGAGATTGCTCACATCACATGCAGTTTGTACATTTACTCAACCCCTTTTTATTTCCTTGTTTGAGAGGTATGCGCGACC
TTGCCTTTCCCCAAACTCTGTGGTTTACCTCTTCACCTCCCACGGGCCCAATGTTAAGGGGGAGGGTGTGGCCTAACTGCAGAGTTGGAACCTAAAGTGG
GAAAGATAGGGTCAAGTAAAGAGTAATAAAATGAGTCATCTCTCCCA

This is probably not a useful sequence.

Problems:
  • Probable foreign DNA contamination
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.979719
Expected error %
0.880056
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0186P07
Clone
Clone name
hba-186p7
LE_HBa0186P07
P186P07
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found