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Clone Read LE_HBa0081D03_T7_67349

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0081D03_T7_67349
Primer
T7
ID from Seq. Facility
LE_HBa_081_D03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
762 trimmed for vector and quality, 805 raw
Sequence
>LE_HBa0081D03_T7_67349 (raw untrimmed)
CTCGGTCCCGCGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAATAGGCACTCCACAATGGCTCTCTTCTGTGAGCACACTGTCAAGATCTTAA
CATACACCTTATCTTATCATATCAGTGACTCTCTGGTAACCTACAGAAGCATAGCAATAAGAGGGTTAATTACACAGCCAGGATTAAAGTTGGCCTCGTC
CTATCAAACTAACAATTTCATTCGTACTCTATTCTCCAGCCTTCCATTTCCTTCCTTTATGAAGAAAATGGTTGGGTATGTGTGGTGTTAGCCATGAGGA
ATGACTTGAAAATCATAATCTCTAATCCTTAAGCTACCAAACGGGAACTAGAAACTATTTTTCTCGCAAACAGCAAGGTAAGAATATTCCTTTTATCTTT
GATGAAGACCTCAACTACACTATAACATTGAGACAGAAGACAAAGGTACATACCGCCATGGGAATTCACTTGTGTCAATTCCAGCTTGGTGAAGTTCATC
AACATACTGTAAAGCTTCTCTACATTCCTCACGATCATCAAAAAATTCTCTCTTCTCACCTTCTATTTGGAATGCTTCATGGCCTTTGCCAGCAACCACC
TGCAGGGTGGTTAATAGGAACTGAATTAAACAACACAAATAAAATTGAATTGCCTGGTGAGCACTTCTATTATGAATATCTTTTACCCATATAAGTTGTA
GCTTGTACCATCAGTTAGATTTTAAAAACAAATAACAATGACAATGAAGAAGAATGGAGACAAGGAACTTACAACTATATCACCTTCCTCACCCATGGCA
ACGCC
>LE_HBa0081D03_T7_67349 (trimmed for quality and cloning vector)
AGCTTAATAGGCACTCCACAATGGCTCTCTTCTGTGAGCACACTGTCAAGATCTTAACATACACCTTATCTTATCATATCAGTGACTCTCTGGTAACCTA
CAGAAGCATAGCAATAAGAGGGTTAATTACACAGCCAGGATTAAAGTTGGCCTCGTCCTATCAAACTAACAATTTCATTCGTACTCTATTCTCCAGCCTT
CCATTTCCTTCCTTTATGAAGAAAATGGTTGGGTATGTGTGGTGTTAGCCATGAGGAATGACTTGAAAATCATAATCTCTAATCCTTAAGCTACCAAACG
GGAACTAGAAACTATTTTTCTCGCAAACAGCAAGGTAAGAATATTCCTTTTATCTTTGATGAAGACCTCAACTACACTATAACATTGAGACAGAAGACAA
AGGTACATACCGCCATGGGAATTCACTTGTGTCAATTCCAGCTTGGTGAAGTTCATCAACATACTGTAAAGCTTCTCTACATTCCTCACGATCATCAAAA
AATTCTCTCTTCTCACCTTCTATTTGGAATGCTTCATGGCCTTTGCCAGCAACCACCTGCAGGGTGGTTAATAGGAACTGAATTAAACAACACAAATAAA
ATTGAATTGCCTGGTGAGCACTTCTATTATGAATATCTTTTACCCATATAAGTTGTAGCTTGTACCATCAGTTAGATTTTAAAAACAAATAACAATGACA
ATGAAGAAGAATGGAGACAAGGAACTTACAACTATATCACCTTCCTCACCCATGGCAACGCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.966457
Expected error %
0.493636
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g63680.1 Score 64 E Value 9e-11 Identity 21.80% Align. Length 146bp (19.16%) Frame 3
68414.m07206 Mur ligase family protein contains Pfam profile: PF01225 Mur ligase family, catalytic domain
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0081D03
Clone
Clone name
hba-81d3
LE_HBa0081D03
C08HBa0081D03
P081D03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found