Clone Read LE_HBa0105B17_SP6_68048

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0105B17_SP6_68048
Primer
SP6
ID from Seq. Facility
LE_HBa_105_B17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
721 trimmed for vector and quality, 904 raw
Sequence
>LE_HBa0105B17_SP6_68048 (raw untrimmed)
GGGGCCAACTTTACATTGGCATCAATGTACAAGCTGTTTTTATCCCCAAATTTCACGATTCTTTCAGATTTGCGGCCCCATTTCAGTTTCATTTTTTTAG
TAATTGAAGAAATTTTGGCATTGGAAAAAAATTGGTTTGCTGTGACGGAGAACATTGTGTCGATATTAATTAAACATGGTGAAAGGTGAAATTCATTAGT
TGGTTTTAATTATGATTCATTTGTTATAATTATGATTTGTTGATTTAACATGGAAAACATTGTGTCGATTTTTTCGGTCATTTTAAGATATGTAATATAG
ATTATAGCTTGTTTTTTTTGAATGAAACAGTGATTTGATATATATACCGTATCTGAAAAATAACACGTAAATGATGTGTTTGAGTTTTAATAAAATGAAA
GATTCGCATAATACTTGATTTATGAACAAAATAGAGAAAATGAATTTGATGGTACAATGTGTTCAGTCACTAGTCAAAAAATAAGTAGTTATAATTCTGT
GGACCGTCGAAGTATGATAGTTATATTAATCGTATATGAAACTTATACGAAACTTGTATTAATTATGTATGAAATTTGGTTTTTGTTGAAATTAGAATAT
ATGTTTCTGTTTGGCATATGAAGGTAAAATGTTGATATATTTTTGTATGAATTTTGTATGAAAATTGTATTCTTTTTGTTTATTTTTTTTGTTAAGTTAT
TATTTTCTTGTGATGATGAAAGTTATAACAATTGTGTATGAAATTATTATCAATTTATTTTATGAATGGGACATCTTTTAAAAGTTAAATTAAATAGTTA
TAGGTCATTGAAATGTATTCTAAATGTGTATGAATTATTTGGCAATATTTGGATTATGTTATACAAAAGTTATCCTTAAGGTGGTTAACAGGTAAACACT
CGAT
>LE_HBa0105B17_SP6_68048 (trimmed for quality and cloning vector)
TGTACAAGCTGTTTTTATCCCCAAATTTCACGATTCTTTCAGATTTGCGGCCCCATTTCAGTTTCATTTTTTTAGTAATTGAAGAAATTTTGGCATTGGA
AAAAAATTGGTTTGCTGTGACGGAGAACATTGTGTCGATATTAATTAAACATGGTGAAAGGTGAAATTCATTAGTTGGTTTTAATTATGATTCATTTGTT
ATAATTATGATTTGTTGATTTAACATGGAAAACATTGTGTCGATTTTTTCGGTCATTTTAAGATATGTAATATAGATTATAGCTTGTTTTTTTTGAATGA
AACAGTGATTTGATATATATACCGTATCTGAAAAATAACACGTAAATGATGTGTTTGAGTTTTAATAAAATGAAAGATTCGCATAATACTTGATTTATGA
ACAAAATAGAGAAAATGAATTTGATGGTACAATGTGTTCAGTCACTAGTCAAAAAATAAGTAGTTATAATTCTGTGGACCGTCGAAGTATGATAGTTATA
TTAATCGTATATGAAACTTATACGAAACTTGTATTAATTATGTATGAAATTTGGTTTTTGTTGAAATTAGAATATATGTTTCTGTTTGGCATATGAAGGT
AAAATGTTGATATATTTTTGTATGAATTTTGTATGAAAATTGTATTCTTTTTGTTTATTTTTTTTGTTAAGTTATTATTTTCTTGTGATGATGAAAGTTA
TAACAATTGTGTATGAAATTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.882188
Expected error %
0.299925
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0105B17
Clone
Clone name
hba-105b17
LE_HBa0105B17
P105B17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found