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Clone Read LE_HBa0105J24_SP6_68446

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0105J24_SP6_68446
Primer
SP6
ID from Seq. Facility
LE_HBa_105_J24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
399 trimmed for vector and quality, 825 raw
Sequence
>LE_HBa0105J24_SP6_68446 (raw untrimmed)
CGGGGCCCTAAGTTTTTGTTTTTTAATTTTTTTCTCCACTCGCTAAACTTTTTATTTTCAGCGTGATTCCACTCTCAAAACTCTTTTGATTTAAGTTTTT
GATAGGTGTTCTTGAAGTGGATCCTTTATATTGTTTTGTTGGGGTGTTTTAGGATTTCATGAGATGAAAGTGATTATTTTGAGTGTTCTTTTAAATGGAT
TAGTGTGTACTAGTTGGTTAATTGAATCTAAGAAAAACTTGAAAAAATAAATTGAATAAAAGCGATTTAGGGTAAAAAAAAATGAGAGGCAAAATTCATC
GAATTAGGTCTGGAAAGATTTTTTGCGCGGCACATCCTAGATGCTCCCAAGGGGATGGGGTGATGCTCGTGCAGTGCACCCATATGTAACCTCTGATGTT
AGGGTCGTCTGCCCCACTCTTTTTTTGTCAATTGTCCAATTTGAGCTCATTTTATTTTTGGGGGTGCACACACTTTTTTTTTTTTTTCTCCCCCCCACAC
CCAAACCACCCAGTTTATTAAAAAAAAAAGGGGAGTAATCACTTGATATTACTATTCTATTTTCATATGTTTGTTTAACCAATATAATCTCTCGCAATTT
TACATTCTTTCTAAATATGATTCTTAACGCTCCTTATATACTACTGTCCTTATATATCTCTTGTTTTATCTTTATATACTTATATCACTGCTTTTCTTAA
TTTCTCTTCTTGTTTTCACTTTATTTTCTTTCTTTTTCTTGCTTTATCCTTTTACTCTATCTTTTTCTCCCTATTGCCTCTAACCCTACTCTATCACTTT
GCTTTAACCCGTTGAGTCTACATCT
>LE_HBa0105J24_SP6_68446 (trimmed for quality and cloning vector)
TTTTTATTTTCAGCGTGATTCCACTCTCAAAACTCTTTTGATTTAAGTTTTTGATAGGTGTTCTTGAAGTGGATCCTTTATATTGTTTTGTTGGGGTGTT
TTAGGATTTCATGAGATGAAAGTGATTATTTTGAGTGTTCTTTTAAATGGATTAGTGTGTACTAGTTGGTTAATTGAATCTAAGAAAAACTTGAAAAAAT
AAATTGAATAAAAGCGATTTAGGGTAAAAAAAAATGAGAGGCAAAATTCATCGAATTAGGTCTGGAAAGATTTTTTGCGCGGCACATCCTAGATGCTCCC
AAGGGGATGGGGTGATGCTCGTGCAGTGCACCCATATGTAACCTCTGATGTTAGGGTCGTCTGCCCCACTCTTTTTTTGTCAATTGTCCAATTTGAGCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.940862
Expected error %
1.69512
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0105J24
Clone
Clone name
hba-105j24
LE_HBa0105J24
C12HBa0105J24
P105J24
Clone type
BAC
Contamination
none
Estimated length
144,908
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found