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Clone Read LE_HBa0128P15_SP6_69484

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0128P15_SP6_69484
Primer
SP6
ID from Seq. Facility
LE_HBa_128_P15-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1214 raw
Sequence
>LE_HBa0128P15_SP6_69484 (raw untrimmed)
GGTTTTTCGGCCATATATGGACTAATATTTGTTGCTTCCTANCTGAGATTCGTTCACTCACCCTATCTCGTATTGTATGAACAATCGCTCCTGTGGACTT
TGCAATGTATTGGATCTTCTCTGCTTCCCTTTGTTCAAGTCTGTATCCACAATCTTGGTTGTTGATCGACTCTCTATACTTCGATATAATCTCATGTTCG
ACTACTACCATAAGTGCTATTGNACGATCTTCGTAGAGTTTGTTTACCAGCTGAAGCAATCCACACGTTTCTGCATTGTATCTTACTAGGCAGACATACT
GTCCTTCCTGCACTCTCCATATGCATTCTTTATCTCTACTTCTTGGCACTTTTGAGATATGACATTCGCGTCTGCAATCTCTTCGCGGCTTCTAGTATTA
CATTCTTNCATTTCGAACTGACTCATAGGCCAATCGGTTTGGTCATCACCTTCTGTGCATTACAGGCTTGTCGTAGTGTATCCCTGTATCCACTCGTTCA
TCCATCATTAGCCCTTATGGCGGCGCGGTAGGTTTACGTTTCCACATCTTCGTCTACTGTCGAGTCGATTCAACTTCTTGCCTGCTTCGACTATGACTGC
ATATATTTTTTCCCATAGAAACTTTCTACGAGCCCACTGTCTCGTTTCTTACACTCTGATGATTCTCCTCGTNGATGTCTTTCGATTCGTATCACACTAT
GCAGTCCTACAATCTCCTACGACTGTGTATATNGAAAGAAATGATCTGCCACACTTCTATCCTTTATGGCACGAAGCGACTTTCGAAGTCCTNAGAGCAG
TGACTATTACCTTCTACTAATAGCAATGAGCTAACGCAGTAGTAGAGTAAGACATCTCTATTCCAATACACTATGCTAACATCTCCACATAAAACAAGTA
GGTATATCATCTCATCCTCCAGTAGTCATATCGCNATCCCAATAGAAGATAGTATNTCATCTCCTTTTTTTTTAGTCTCGCACGTTGTTCACTCATAAGC
TTACGAAAATGTATGTCAACGTCTAGCCACTCTCCTTGTATATGTCTCCATAGTGCGNATAATCGGAACAATCGGCGTTTTCGTTGATAACGCTATCTAG
CTGTCCAATGACATACAGTAGACAATGTAAAGAACTCTAAACCCTTTCTGGTTAGACATACAACTTCTACTTAGAATTGTATAGAATAGTCAATGGCAAT
CCCTGTAAAGGGTC
>LE_HBa0128P15_SP6_69484 (trimmed for quality and cloning vector)
TGTAT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.319417
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0128P15
Clone
Clone name
hba-128p15
LE_HBa0128P15
P128P15
Clone type
BAC
Contamination
none
Estimated length
48,542
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found