Clone Read LE_HBa0136C06_T7_69611

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0136C06_T7_69611
Primer
T7
ID from Seq. Facility
LE_HBa_136_C06-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
0 trimmed for vector and quality, 881 raw
Sequence
>LE_HBa0136C06_T7_69611 (raw untrimmed)
GGAAAAAACTGGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGAGTATTCTATAGTGTCACCCATTTAGCTTGGCGTAATCATGGT
CATAGCTGTTTCCTGTGCTTAATTGTTCTCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAG
CTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGAACCCCTTGCG
GCCGCCCGGGCCGTCGACCAATTCTCATGTTTGACAGCTTATCATCGAATTTCTGCCATTCATCCGCTTATTATCACTTATTCAGGCGTAGCAACCAGGC
GTTTAAGGGCACCAATAACTGCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGC
CATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT
GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCC
AGGTTCCCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTT
GCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCCCCAGCTCACCGTCTTTCCTTGCCCTACGGAATTCCG
>LE_HBa0136C06_T7_69611 (trimmed for quality and cloning vector)

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
  • Probable foreign DNA contamination
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, no insert found (only flanking vectors)
Quality trim threshold
14.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0136C06
Clone
Clone name
hba-136c6
LE_HBa0136C06
P136C06
Clone type
BAC
Contamination
none
Estimated length
73,638
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found