Clone Read LE_HBa0136D06_T7_69659

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0136D06_T7_69659
Primer
T7
ID from Seq. Facility
LE_HBa_136_D06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
616 trimmed for vector and quality, 867 raw
Sequence
>LE_HBa0136D06_T7_69659 (raw untrimmed)
TTTAGCTTGGTCCCGCGGGTTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTAATGAGAAACATGAAACCCCTTTAAGGCCCCCACAGAACTCCTACA
AGGAAAAGCGACTGTTTTTCGGCCGACCTCAATGACACCTAATATCTCCACTAAAGTAGGATATTACCGACAGAGACCCAGGCTCACCACTGTAGGAGTA
CATCATGTAGGACATGTGGAATGTGGTGTTTAGAAACTGAATTTTACTGAATTTAAAATGCGGAGGTGTGGGAAATGCTTCACAATGGTGCCCCAGAGCA
TAAGCCCAAGATAACTTTACTCCCTCTGGTCCATTTAACGTGTCGGGTTTTCCTTTGGCACGCCCCTTGATAAAACATTACCAAAAAGGGTAAGTTGACC
AGATTAACCTCATTTATCAGTATATACTAATTTAAGACTACTTTTTTGTCACCACAGAAATTGAGCACGGATAAAGGAGGAAACTGCACTATATCTTAAT
TTCTAAACTGAAAACCATTTTGGACTACTTATATTGGAGTAATATTCTAAGACAGGAACATTTTACAATCTCGAATACGCTCGCATGATCTGCCCCACGT
TATTGCGGCCACCCCCCCGGTGAGCCCCAATTCCTCTTTTGTAACATTGATTTTTCTGATATGATATGGTCCTACATTCATTAAATGTGTATATCTCGTA
CTTCCGCAAGGTCTAACTTCCATTTAGCGTTGCTCCAGGGGGAGCTTTGCTCGTAAGCCTTTTGTACGCAACTCACTAACTCCTCCAAAACTGGAAAACT
GGGTCGACATACGTACATATCTAAAGGCTCCTTCCGGGATATCCTTTCTTGCCTGCGCCTGAGTTTN
>LE_HBa0136D06_T7_69659 (trimmed for quality and cloning vector)
AGCTTTAATGAGAAACATGAAACCCCTTTAAGGCCCCCACAGAACTCCTACAAGGAAAAGCGACTGTTTTTCGGCCGACCTCAATGACACCTAATATCTC
CACTAAAGTAGGATATTACCGACAGAGACCCAGGCTCACCACTGTAGGAGTACATCATGTAGGACATGTGGAATGTGGTGTTTAGAAACTGAATTTTACT
GAATTTAAAATGCGGAGGTGTGGGAAATGCTTCACAATGGTGCCCCAGAGCATAAGCCCAAGATAACTTTACTCCCTCTGGTCCATTTAACGTGTCGGGT
TTTCCTTTGGCACGCCCCTTGATAAAACATTACCAAAAAGGGTAAGTTGACCAGATTAACCTCATTTATCAGTATATACTAATTTAAGACTACTTTTTTG
TCACCACAGAAATTGAGCACGGATAAAGGAGGAAACTGCACTATATCTTAATTTCTAAACTGAAAACCATTTTGGACTACTTATATTGGAGTAATATTCT
AAGACAGGAACATTTTACAATCTCGAATACGCTCGCATGATCTGCCCCACGTTATTGCGGCCACCCCCCCGGTGAGCCCCAATTCCTCTTTTGTAACATT
GATTTTTCTGATATGA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.964065
Expected error %
4.83424
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0136D06
Clone
Clone name
hba-136d6
LE_HBa0136D06
P136D06
Clone type
BAC
Contamination
none
Estimated length
117,107
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found