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Clone Read LE_HBa0145M24_T7_71663

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145M24_T7_71663
Primer
T7
ID from Seq. Facility
LE_HBa_145_M24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
697 trimmed for vector and quality, 808 raw
Genbank Accession
DU063870
Sequence
>LE_HBa0145M24_T7_71663 (raw untrimmed)
TCTCATCCTGGCCCCGGGGTTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGTTGTGGTATTGGGTTTTTTCTTAGCTCAATAAAAAGCTAAAGAAT
TAGTTGGTTGGTGAAGTTTTGTTTATTTCTCCTAATTGCTGAAGTTTAAAGATTTGAACTTGGTTATGTTTATGTGTTGAGTGGATGTCTTGTTTCTGTT
TGATTTTAGTGTGAGTTTGTTTTTTTCAGTTGGCAATGCTGCAGCACAGCGAAGACGGCAACATGCTGTTACAGTGGGGAAGGAAAGGAGAGAAGCCCTG
ATGCGGACAAAGCGTCTATGCAGAGTTGGAGTTAGTGCTGATTTTGATGAGGCCTCTATGGATGATAGTGACATGATGATTGAAGAAGATCAAGCAATTT
TGGAGGCCTTGACTTCGGCAGCTGTGGAAGAATTAAAGCTTGATGTTGCCTACCAGTATGGAGAATACTTTTTGTTTTGCTATGAAGAAATTTTGGTTGC
GAACAGTGGTTTTTTGGTGTTACATTTTGTTTTCTATTTTAAATTTCAGTTATCTTGGTTAGTTGTAATTGCTTCTGTTTACTTTCGTTGTCTTCTTGTG
ATGTTACGTTTACTCTATCCTCTTTTAACGCCCTTAATCCTCATTGGTTGATTACGTAGTCCCTATTTGTATAGCATTCTTGGTGTATTTCTAGTTAGCA
ATTTCATACGAATATTTGTGATATATAGATAATGTCTAATCTGTATAAATATACAAATTTTTTTCTGTTTTAAAGGACCAGAACTCAGAAAAATGATAAT
TAAGGATC
>LE_HBa0145M24_T7_71663 (trimmed for quality and cloning vector)
AGCTTGGTTGTGGTATTGGGTTTTTTCTTAGCTCAATAAAAAGCTAAAGAATTAGTTGGTTGGTGAAGTTTTGTTTATTTCTCCTAATTGCTGAAGTTTA
AAGATTTGAACTTGGTTATGTTTATGTGTTGAGTGGATGTCTTGTTTCTGTTTGATTTTAGTGTGAGTTTGTTTTTTTCAGTTGGCAATGCTGCAGCACA
GCGAAGACGGCAACATGCTGTTACAGTGGGGAAGGAAAGGAGAGAAGCCCTGATGCGGACAAAGCGTCTATGCAGAGTTGGAGTTAGTGCTGATTTTGAT
GAGGCCTCTATGGATGATAGTGACATGATGATTGAAGAAGATCAAGCAATTTTGGAGGCCTTGACTTCGGCAGCTGTGGAAGAATTAAAGCTTGATGTTG
CCTACCAGTATGGAGAATACTTTTTGTTTTGCTATGAAGAAATTTTGGTTGCGAACAGTGGTTTTTTGGTGTTACATTTTGTTTTCTATTTTAAATTTCA
GTTATCTTGGTTAGTTGTAATTGCTTCTGTTTACTTTCGTTGTCTTCTTGTGATGTTACGTTTACTCTATCCTCTTTTAACGCCCTTAATCCTCATTGGT
TGATTACGTAGTCCCTATTTGTATAGCATTCTTGGTGTATTTCTAGTTAGCAATTTCATACGAATATTTGTGATATATAGATAATGTCTAATCTGTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.933613
Expected error %
0.830438
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At5g03070.1 Score 64 E Value 8e-11 Identity 17.30% Align. Length 224bp (32.14%) Frame 2
68418.m00255 armadillo/beta-catenin repeat family protein contains Pfam profile: PF00514 armadillo/beta-catenin-like repeat
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145M24
Clone
Clone name
hba-145m24
LE_HBa0145M24
P145M24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found