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Clone Read LE_HBa0147D05_SP6_72728

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0147D05_SP6_72728
Primer
SP6
ID from Seq. Facility
LE_HBa_147_D05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
590 trimmed for vector and quality, 865 raw
Genbank Accession
Sequence
>LE_HBa0147D05_SP6_72728 (raw untrimmed)
GGTTAATTTGGTCACCTTTTATTTGGGTCAGAATTAAATTTGATAGTTGTATATATTTATAAATTATAAAGTCCGTTAGTGTGGTCCTGCACACTTTATT
ACTATCAATTATAATTTATTTTGGTTTATTAAAAAAGTATATTATTACCAAGTAACTGAGTGAAGAATAATAATTCTCCTATAACTTGCCGTAAGAAATT
TCTTTCCTTTTTATCCTTTTTTGAGAAGCAATAATATGGTTTTTTATTTAAAAAAAATTAAGATGTCCAAAATCTAACTTAGAATATTTGATTATTAATA
TGTTATTATTGTAAATATGAACAACTTTAAAGGCTAATGACATTTGGTAACATGCACTAGTGATAATCGTTAATAATGATTGTGAAGCGTTTTTGCTAGT
AATAATGAATAACAACAGTTAAAGATTATTCTGGAAATGAATATCTTAATGATTTTAAGATTATTTCTTCCAAATAAATTTTGTATTTTTTAAAAAATAT
TTTTTTTATTTATTTATGTTTGTAAGGGTATTTTGGTCATTGTATAAGTTTGAGGGCAAAAGAGCAAGGAGAAAAGAGTAATTTCATAAGGGGTGCATGT
GAAGTGGTTTAAGGCGGAGAGGAAGCAGATCTGAAAATTGGTCGGCGAATAGAAATCAAAGTATATTTATGCTATACTTTTCCCAAATTGACATTATTAC
CCCCTGGGGGTTCTATTCCTTCCCGAATCCCTTTTTGAACACGAAAATTTTTTATACTTCAAAATAATGGTTACTCTTAACCAATCCATCTATCCCTTCC
CTTTCCAAATTTATTAATCGTTTTGGCAAATTCTAATTTTTATTACTTAGACTCGTTTTTTTTTG
>LE_HBa0147D05_SP6_72728 (trimmed for quality and cloning vector)
TATTTGGGTCAGAATTAAATTTGATAGTTGTATATATTTATAAATTATAAAGTCCGTTAGTGTGGTCCTGCACACTTTATTACTATCAATTATAATTTAT
TTTGGTTTATTAAAAAAGTATATTATTACCAAGTAACTGAGTGAAGAATAATAATTCTCCTATAACTTGCCGTAAGAAATTTCTTTCCTTTTTATCCTTT
TTTGAGAAGCAATAATATGGTTTTTTATTTAAAAAAAATTAAGATGTCCAAAATCTAACTTAGAATATTTGATTATTAATATGTTATTATTGTAAATATG
AACAACTTTAAAGGCTAATGACATTTGGTAACATGCACTAGTGATAATCGTTAATAATGATTGTGAAGCGTTTTTGCTAGTAATAATGAATAACAACAGT
TAAAGATTATTCTGGAAATGAATATCTTAATGATTTTAAGATTATTTCTTCCAAATAAATTTTGTATTTTTTAAAAAATATTTTTTTTATTTATTTATGT
TTGTAAGGGTATTTTGGTCATTGTATAAGTTTGAGGGCAAAAGAGCAAGGAGAAAAGAGTAATTTCATAAGGGGTGCATGTGAAGTGGTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.883134
Expected error %
0.218682
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0147D05
Clone
Clone name
hba-147d5
LE_HBa0147D05
C08HBa0147D05
P147D05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found