Clone Read LE_HBa0154J19_T7_75349

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0154J19_T7_75349
Primer
T7
ID from Seq. Facility
LE_HBa_154_J19-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 756 raw
Sequence
>LE_HBa0154J19_T7_75349 (raw untrimmed)
TGTACCCCACTCAAAAAGAGGCCCCCCCCATAAAAAGACCCTCGCGATGCCTTGTCCTGTTACAAACTTCCTATAACTAGATATATCATAGAGGAAAAAC
ACGAGTAAAATTTTATCAGGTGAAGGCACCTTCGGTTAAACGTCAAGTTCGCGCCGTCTGGTACCCTGATGTTTGAAAGCTCTTTAATGGGATGGTGCAT
TTCACTGCTGGTAGTGTCTATTTGACCTATAAGATATTCAATGAACGCTGTTCCTGTGAATGAGGAACTCAACGCACGNTACGATACTCATACGCTACCT
CTCTCTACCTGATCCCGACGTTTATTACGCTTCTTTGTTAGTCTACTTGTGCACATTCTTCTATCTATTCTTATTCATAAGCCGCTTAATCTCTTTCCTC
ACTCATATCACTCACACAATAATATCTAGCACGTCTAGCCGGTATATATGCCCACCCCTGACCTCACACTCCATACACCACGAACAAACCTCTATACACA
TTCTTTTAGATATTACTCTCGACTCCTATCCACCACACCTCTCTCCCTCCTCCCTCTTACAATCACTCGTATTTCTAATTCATCATATCGTTTCTCTCTT
CGACCTCTCTGTTCTGATATTTTTAATTATTTCTACTCCTTCTAATACACTTACCTCCCTCTATCTCTTATTTCACCTTACTTTGCTATCTTTTTACTAT
ATCTACTTATATTACCTTCTTTTCTCCACTCGTTACTCTTGATCGTCTACTCTCAC
>LE_HBa0154J19_T7_75349 (trimmed for quality and cloning vector)
TAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.719407
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0154J19
Clone
Clone name
hba-154j19
LE_HBa0154J19
P154J19
Clone type
BAC
Contamination
none
Estimated length
101,656
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found