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Clone Read LE_HBa0154P09_SP6_75616

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0154P09_SP6_75616
Primer
SP6
ID from Seq. Facility
LE_HBa_154_P09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
541 trimmed for vector and quality, 881 raw
Genbank Accession
DU066319
Sequence
>LE_HBa0154P09_SP6_75616 (raw untrimmed)
GGGGGCCAGGTTTGGACGGGTTGTGCTTTAGGGTGATTAGTGGTAATTCAGCTCTAGAAAAAATTCCCCGTAGAGCCAGACCGAGATGAAATTTATAGTC
AACCTCTCTGCCTCTCAGATAGCTTTCTTTTTCCTCTACAACTTAAACCATAAGATCCCTGAGTTATTGTTTACGCCTACAAGTTATCTCATAATGTGAA
TTAAATCCGTAAAATCTATACAACTTCCATAGTGTAGATACCATTCATTGTTTTGTTTAGTCCCTTTATTGCTAATTACATGTACTCTTATTCCATATTC
TATTTGGCATAAAATAAATTCACATACTCAAATTCTTTGTATTACTTGATGTGGATATGAACAAATGCAACTTTAATAAGGCCAACCAAATGTTGTATTA
AATCGTGCAAATTCCATTTTTTATGCAAGTTAAAGCCTGCATTTTCAAAAAAAAATCAGGGCCCTTAGTCTACTTGGTATTCTACAATCACAGTCATGTT
TGACTTCTTCTTTCTTGTTTTCCAATAATTTTCCAGGTTTTTGCTGAGAAGCAATTGCTGAAGCATTTACAAAAGGAAGTTTCCAGACTTGAAGCAGAGC
TCCGAAGTCCTGACCTTTTCTGTCTCCCCATGTTTACAATTTTACTAATGTATAAAAACCATATAGCACTCAAGTACTATAAATGTTTATATGTTAATTT
TTAGTGAAGTTATTATTTTAGAATAGTATTGAGTAGATGTGGAAAGTAACTATCATAATTTATTAAATTATGAGTAGTAGAAAATGGTGACATTGATACG
GACATCTGTGTATAACATGACGCTCCTGTACACTTATCCTACAGGCTTTCCTCTTATACTTCTATTCCTATGTTCTTTTAC
>LE_HBa0154P09_SP6_75616 (trimmed for quality and cloning vector)
TGATTAGTGGTAATTCAGCTCTAGAAAAAATTCCCCGTAGAGCCAGACCGAGATGAAATTTATAGTCAACCTCTCTGCCTCTCAGATAGCTTTCTTTTTC
CTCTACAACTTAAACCATAAGATCCCTGAGTTATTGTTTACGCCTACAAGTTATCTCATAATGTGAATTAAATCCGTAAAATCTATACAACTTCCATAGT
GTAGATACCATTCATTGTTTTGTTTAGTCCCTTTATTGCTAATTACATGTACTCTTATTCCATATTCTATTTGGCATAAAATAAATTCACATACTCAAAT
TCTTTGTATTACTTGATGTGGATATGAACAAATGCAACTTTAATAAGGCCAACCAAATGTTGTATTAAATCGTGCAAATTCCATTTTTTATGCAAGTTAA
AGCCTGCATTTTCAAAAAAAAATCAGGGCCCTTAGTCTACTTGGTATTCTACAATCACAGTCATGTTTGACTTCTTCTTTCTTGTTTTCCAATAATTTTC
CAGGTTTTTGCTGAGAAGCAATTGCTGAAGCATTTACAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94026
Expected error %
0.406929
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0154P09
Clone
Clone name
hba-154p9
LE_HBa0154P09
P154P09
Clone type
BAC
Contamination
none
Estimated length
123,465
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found