Clone Read LE_HBa0157C02_T7_75747

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0157C02_T7_75747
Primer
T7
ID from Seq. Facility
LE_HBa_157_C02-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1268 raw
Sequence
>LE_HBa0157C02_T7_75747 (raw untrimmed)
ATATCCGTTTTGATTCNTCAAATACAGCGCCGACACTGGAGGCGCGTCACCTGGGAATGCCTCGCCTTTGTCCGGCCATGGCAGAGCGTATCGCTATGCT
TGGGCTACACTCCCTCCCTCCCCTTTTCCCATCCTCTTTTGGAGAGGTACGGGGTCTTTCGTGGTAGACACTTAGTGACTGCCCTTTTGTCCTTCTATAG
TCCAAGTGCGGCTGGTTATTCATGTAGATCATACGATGGCAGAATACACGTAATTACTGATAAGAGAGAAGGAGAGTGAGTATGTCACGTATCGCTAGAC
ACCACTGATGGAATGAGGACTCACTCCAGAGAACTTGGATTTGCGTATCGGCCTTAATAACATGTATATAGATGAGAGCTACATAGTGGTACTAGTACTA
GATCTGCGTGTGAAGTATAGGTAGATGATGATCATTATGTTAATGCGCTATGCCGCAGCCGGTACTGCACGGCTATAAATGTAGCGGCAGAAGTCAGGTA
GAACGTGCATGGGGCGACGAACATGCGAGTTAGTAAATACAAGAACAGTGCTATGTAATTTACGTGCATAGGATTACTCGTGCCTCAGTTGGTGAGTCCC
GTGATCCTAGTGTACTGTTAGTCTCGTGAAAAGTGTTGGTGTTAGTGCGAGTCTTTTGTGCGATTCCTGATAGCGTTGTGATGTGATTCGTATATATACG
GTAGATGGATGTATTGGTTTCTGTGTATGTGACTAACTACTGGTGTGATGGCTGATTGTTACAGTACATGTGTGACTCAGTATTGAAAAGATTACAATAG
AATTCTAATGTTCGTAAACTATATCATTTATTACTTGACTATATAAAGTGTAGAGTAGATGTGTGAGATTCGCAGATCGGTTGTGTGAGAACTGATGAGG
ACGTTTCGGATGTAGTGGGTGAGGAGCNTGAGTCCGATTACCCGCAGTACATTCTTTTGATATCGTAATAATACATGTGCGCTTGTACGATTCTGTTGAA
GGTAGTAGATTTTACTTACTTTATTGAACCATATGTGCACGTACGTCTAACCCCCACTCCCTATGCGCTAAGACAAAAATAACTCCAACACGGTTAATAT
CTATATATATTAATGATTGGATTTATATATGATGATTATGTGCTGGCAGTTATAGTTGAATAGCGTTTATTGATCATAGATGCAGCATTGGTTTNCAAGT
ATGTATGATCTTTAAATTGACCAGTTGTTTAGTAATATGTTGATTAGATTTATGCATATATGGATATT
>LE_HBa0157C02_T7_75747 (trimmed for quality and cloning vector)
CAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.57145
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0157C02
Clone
Clone name
hba-157c2
LE_HBa0157C02
P157C02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found