Clone Read LE_HBa0160M23_SP6_77036

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0160M23_SP6_77036
Primer
SP6
ID from Seq. Facility
LE_HBa_160_M23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
605 trimmed for vector and quality, 902 raw
Sequence
>LE_HBa0160M23_SP6_77036 (raw untrimmed)
GGCGCAAGTTTTCGATTGAAGAGAAGTGGGAAGAGTAAGAGGTGGGTCATGCCGAGCATGGCTAGGACTAAGGATGGACCTTTGTGAGTTTCATTTGAAG
AAGAAAGTATACAAAAAAGAAGATATGAAGGAGTTTTCAGTAATGTGATAATGGTTTCTTGGTATTGCTGTTGTAGGTAGCCATGGATTTGGGGGTCTGT
AAGTGTAGAGAAGCTGTGTTTTTTTGTGGCAGAAGAAACAGAAAATGAAAGCCAAAGCTATGGGAGGAAAAAAATGAGAAGATAATTGAAATGTTGTTTT
GTCTTTAGATGATTATTGGGTTAACGTACTCACTTAAGTCCACTTTTTTTATTAGTATAATATATATATTGGATTCAATACTTAGTTTCAAATTTTAACT
TTAATTCAATAAATAAGCACGTAATTTTTGAAGCTAAAATGCCAAATGCTCCCATGTATATTAATGAGTCAATCAGTGGCTGCCAACTAATTAAACATTT
TACATGTCATTTTGAAATTAAAAAAAAAATATTTTACATGTCATTTTGAAATAAAAAAAAATAAAATTAATTTTAATTAATAAAAAAGAGATTCATTAAG
GGTAGAATTGTCATTTCAGTATTTTTTTACTTTTGTGGGCCTCGGAAATTACCCCTCACTCGCACAGAGAATGCGTGTATTTTATGCTTTTTCCAGGTAG
AAAATCGCGTGTTTATTTATTCAAAAATGGGAATATAATATTCTTATTTTTGCACTATGAAATTTTAAGTCTATCTTAAGGCAAATAAAAGTATAACAAA
TTTTCTAATGCGCACATAGTCCTTTTATAAAATAACTCCCAAAGCAACATTTCTCTAATACACTCTACTTATCGACCACAAAATCATAAATTTTCTCAAA
TA
>LE_HBa0160M23_SP6_77036 (trimmed for quality and cloning vector)
AGGTGGGTCATGCCGAGCATGGCTAGGACTAAGGATGGACCTTTGTGAGTTTCATTTGAAGAAGAAAGTATACAAAAAAGAAGATATGAAGGAGTTTTCA
GTAATGTGATAATGGTTTCTTGGTATTGCTGTTGTAGGTAGCCATGGATTTGGGGGTCTGTAAGTGTAGAGAAGCTGTGTTTTTTTGTGGCAGAAGAAAC
AGAAAATGAAAGCCAAAGCTATGGGAGGAAAAAAATGAGAAGATAATTGAAATGTTGTTTTGTCTTTAGATGATTATTGGGTTAACGTACTCACTTAAGT
CCACTTTTTTTATTAGTATAATATATATATTGGATTCAATACTTAGTTTCAAATTTTAACTTTAATTCAATAAATAAGCACGTAATTTTTGAAGCTAAAA
TGCCAAATGCTCCCATGTATATTAATGAGTCAATCAGTGGCTGCCAACTAATTAAACATTTTACATGTCATTTTGAAATTAAAAAAAAAATATTTTACAT
GTCATTTTGAAATAAAAAAAAATAAAATTAATTTTAATTAATAAAAAAGAGATTCATTAAGGGTAGAATTGTCATTTCAGTATTTTTTTACTTTTGTGGG
CCTCG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.917119
Expected error %
0.355776
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0160M23
Clone
Clone name
hba-160m23
LE_HBa0160M23
C12HBa0160M23
P160M23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found