Clone Read LE_HBa0164M20_T7_77799

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0164M20_T7_77799
Primer
T7
ID from Seq. Facility
LE_HBa_164_M20-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
671 trimmed for vector and quality, 878 raw
Genbank Accession
DU067406
Sequence
>LE_HBa0164M20_T7_77799 (raw untrimmed)
CCTACCTTGGTACCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGCAAACGTCAGCTCAAAAACCGTTTTGAGAGAATACAAAATCCAGT
ATGTAAGCCATTGCTCTTCATCGACAGGGGATTTGGTCTCAATAGCCCTAATTGAAGCATACCTGTCAAATAACCCAAAACCCAGTACCAAAACATCACA
TATGAAGCCGTAAAAGAGGGAAAACAATAGGATCACCAAGTGAGAACCCACTTACAGAGGATATACCAAACTAACCACTGGCCTGCAATTTCAAACGCAC
AAGAGAAAACAAAAATTAGCTTCACAAGAATAAATTGCTCCTAAATTGGTCCATCATCCATGAATTAATTAATTAATGAAAAAAACACAAAGGTATCGAA
GCTTGAGGAAGAAGAGATACCCTGCAAGAACATCAAAGTTGCTGATTATGACCTTGAGTAAGCTTACTATACCTCCTCCAGATCCTCCCATTTTGTTAAA
CTAAAAAATTACTAAAATTATGAGTTGTAAGTCTGAGATTTGCAGTATTAGTTGCAGCAGCAGAAAGATAGGTGTAGATTTGGAAGATGAGAAGGAGAGT
TATCGCTTTGTGTGTTCAGAGAAGAGTAAAGTTACAGAGGCTTCTCTCCTGTCGTTTATATTCCAAAAGAAACAAAATAATGCAGCTAGTGTGTGTTTAT
TTTTCAATAATAACTACTCTACTTCCTTATGCTACTGTGCGCCGATTAATTTCTAAAATAATTTTTTATTTTATTTATTAATTAATAGACATGGAAATAA
ATAAATTAAAAAATACTCCTTAGATTAAATTTTCTATGCTAAATTAATACTTTTTTTCCTCTAATTATCTTAGAAAAT
>LE_HBa0164M20_T7_77799 (trimmed for quality and cloning vector)
AGCTTGGCAAACGTCAGCTCAAAAACCGTTTTGAGAGAATACAAAATCCAGTATGTAAGCCATTGCTCTTCATCGACAGGGGATTTGGTCTCAATAGCCC
TAATTGAAGCATACCTGTCAAATAACCCAAAACCCAGTACCAAAACATCACATATGAAGCCGTAAAAGAGGGAAAACAATAGGATCACCAAGTGAGAACC
CACTTACAGAGGATATACCAAACTAACCACTGGCCTGCAATTTCAAACGCACAAGAGAAAACAAAAATTAGCTTCACAAGAATAAATTGCTCCTAAATTG
GTCCATCATCCATGAATTAATTAATTAATGAAAAAAACACAAAGGTATCGAAGCTTGAGGAAGAAGAGATACCCTGCAAGAACATCAAAGTTGCTGATTA
TGACCTTGAGTAAGCTTACTATACCTCCTCCAGATCCTCCCATTTTGTTAAACTAAAAAATTACTAAAATTATGAGTTGTAAGTCTGAGATTTGCAGTAT
TAGTTGCAGCAGCAGAAAGATAGGTGTAGATTTGGAAGATGAGAAGGAGAGTTATCGCTTTGTGTGTTCAGAGAAGAGTAAAGTTACAGAGGCTTCTCTC
CTGTCGTTTATATTCCAAAAGAAACAAAATAATGCAGCTAGTGTGTGTTTATTTTTCAATAATAACTACTC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.95456
Expected error %
1.56665
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g74520.1 Score 64 E Value 6e-11 Identity 11.30% Align. Length 434bp (64.68%) Frame 1
68414.m08633 ABA-responsive protein (HVA22a) identical to AtHVA22a [Arabidopsis thaliana] GI:4884932
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0164M20
Clone
Clone name
hba-164m20
LE_HBa0164M20
P164M20
Clone type
BAC
Contamination
none
Estimated length
98,926
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found