Clone Read LE_HBa0034K05_SP6_7784

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0034K05_SP6_7784
Primer
SP6
ID from Seq. Facility
LE_HBa_034_K05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
517 trimmed for vector and quality, 879 raw
Genbank Accession
DU027077
Sequence
>LE_HBa0034K05_SP6_7784 (raw untrimmed)
TTTAATTTAGTGTAACGTCGATTTGTACACGGGCCAACTTATAGCACACCTATACTAATNTCTGAAGGCACTTACTACCTTCTACCAACACAGGTACCGG
ATAACTCGGTCCACCAAGGTTTGGACATATGGGAAGAAATCTCTTAGTGTTTTTGCCTCTGCTGCTGGGATTTGAACCAGAAGCCTCATGGTTCTTTGAC
CCACCATTGACCACTAGGTCACCCCGTGGATGCTCAAAAGAAGAATGTACTATAGGACAACAAAACAGTAAAAGCTCATACCATTTCCATTTCTCAATCC
CGGAGAGAATAAAAACATAAAAGATACACCTTTCAAACAAGATGACAAGAATGCTTCCAACTGGGTTTTGTGATAAAAACGGACACGGTGTTATTAGTTT
AATTTCTGCTTCAGAGATCATTTATCGAAGCATTTTGCCCTTCCCAAAATCAAAAGACAAATTCATGCTCGAACAGATTGCTCCGGACATGTAAATAGAA
CAGAATAATAAATCCATGTGACACATAGATAACAAGACAAATAAGGTTAAAAATATAGGTGAGATTTTAACAAGAACTAAACTTTACTAATCGAAAATAT
ACAGGAAAATATAAAGAACATGTTCTGACAACCTCTCACCCCTCATAACAGCCAGCAACACAACTTTAAAGCGTCATTTTTCCATATTCTACTTATTCTT
TCATTTCTAAAGACCACAGCAAGTTCATTAGTTCAATTTATCTTCTCCTCAACTTAATGCCCCAGTTCATAACAGGTTTCATCCACAATAAATATTAATT
TCCTTATGAATCCCGCTTAAGTAATTAAATTCGAAAATAAATTCTCTCATTCTTACTTCTCACATAACGCTAGATTCCT
>LE_HBa0034K05_SP6_7784 (trimmed for quality and cloning vector)
CACACCTATACTAATNTCTGAAGGCACTTACTACCTTCTACCAACACAGGTACCGGATAACTCGGTCCACCAAGGTTTGGACATATGGGAAGAAATCTCT
TAGTGTTTTTGCCTCTGCTGCTGGGATTTGAACCAGAAGCCTCATGGTTCTTTGACCCACCATTGACCACTAGGTCACCCCGTGGATGCTCAAAAGAAGA
ATGTACTATAGGACAACAAAACAGTAAAAGCTCATACCATTTCCATTTCTCAATCCCGGAGAGAATAAAAACATAAAAGATACACCTTTCAAACAAGATG
ACAAGAATGCTTCCAACTGGGTTTTGTGATAAAAACGGACACGGTGTTATTAGTTTAATTTCTGCTTCAGAGATCATTTATCGAAGCATTTTGCCCTTCC
CAAAATCAAAAGACAAATTCATGCTCGAACAGATTGCTCCGGACATGTAAATAGAACAGAATAATAAATCCATGTGACACATAGATAACAAGACAAATAA
GGTTAAAAATATAGGTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.966725
Expected error %
0.582398
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0034K05
Clone
Clone name
hba-34k5
LE_HBa0034K05
P034K05
Clone type
BAC
Contamination
none
Estimated length
122,542
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found