Clone Read LE_HBa0021H05_SP6_79832

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0021H05_SP6_79832
Primer
SP6
ID from Seq. Facility
LE_HBa_021_H05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
526 trimmed for vector and quality, 802 raw
Genbank Accession
DU062593
Sequence
>LE_HBa0021H05_SP6_79832 (raw untrimmed)
CCATTGTCCACTGTGTCAACTCAAGCTTAATTTCGTGTGCAATTACTGTTGTTTAATAGTATGATATGTCTATTGATTATGGTTTGCTATTGGACAATTT
GTTATAAATATACATTATGTGATATTGAGTTAATACTAACAGGAACATAAGGATTTTGAGATGATAACAAAGGAGATAGGCCCAACATTAAAGACTTTTC
ATCGTATGATAGGTTTTTATTAAGGGGGAGGATTGTGGTAGGTTGTCGGTCAATGCAAAATAGTCCTACTGTATGTAAAGGACTCAAAAATCAGTATGGT
CTTGGCGTTATGCTTAGCTAGTGCATTGGTATTGATTTTGGTCTCTTAGTGTTGAAGTTAATTTGGTTCTTTTCTTCTCCCCCTTTATAGCACATGTATT
TTCTCTGTAGTAACAAATGGAGTACTTCATAATCCACAAAATCAGTGACTCTTTCAGTCAACATCTCCAACAACAGTTGGGGGATGAGACTGGTGGGAGA
GGAAGTATGAGTTGGGCTCAGCTTCTTTTTTTGGCTTTGTGTGTGTGGGGTGGTGGGGGTGTAAAAAAATATTTATATTTTTTAAGTATTATACTCGGTT
TTTTTACGTAGTTTATTTTTTTACAGGTGTTCTTTATACTATTACTAATCTATAGCTCGTGTTTTTTTACCTCAGATTTTGTATTATCACATGGTAGATT
TAATGCGCATAGTTCTAATTAGTTTTTTGTGTTATGGGTGTAAAATACATATTTTCTATTTTTAATATATTTATTTTTATTAGTATTTTTACAATTTTCT
CG
>LE_HBa0021H05_SP6_79832 (trimmed for quality and cloning vector)
GCTTAATTTCGTGTGCAATTACTGTTGTTTAATAGTATGATATGTCTATTGATTATGGTTTGCTATTGGACAATTTGTTATAAATATACATTATGTGATA
TTGAGTTAATACTAACAGGAACATAAGGATTTTGAGATGATAACAAAGGAGATAGGCCCAACATTAAAGACTTTTCATCGTATGATAGGTTTTTATTAAG
GGGGAGGATTGTGGTAGGTTGTCGGTCAATGCAAAATAGTCCTACTGTATGTAAAGGACTCAAAAATCAGTATGGTCTTGGCGTTATGCTTAGCTAGTGC
ATTGGTATTGATTTTGGTCTCTTAGTGTTGAAGTTAATTTGGTTCTTTTCTTCTCCCCCTTTATAGCACATGTATTTTCTCTGTAGTAACAAATGGAGTA
CTTCATAATCCACAAAATCAGTGACTCTTTCAGTCAACATCTCCAACAACAGTTGGGGGATGAGACTGGTGGGAGAGGAAGTATGAGTTGGGCTCAGCTT
CTTTTTTTGGCTTTGTGTGTGTGGGG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.943212
Expected error %
0.0609756
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0021H05
Clone
Clone name
hba-21h5
LE_HBa0021H05
C08HBa0021H05
P021H05
Clone type
BAC
Contamination
none
Estimated length
95,380
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found