Clone Read LE_HBa0052E06_SP6_81226

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0052E06_SP6_81226
Primer
SP6
ID from Seq. Facility
LE_HBa_052_E06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
639 trimmed for vector and quality, 832 raw
Sequence
>LE_HBa0052E06_SP6_81226 (raw untrimmed)
TGTGGCTTCAGTGTCTGAGCNCNNCNNNGNCCCCNNNNNNNNNNANNCNNNNNNANNNNNGNGGNNNGGNNCCCCCCTTAAAGGAANGNANGGACCAACA
CCGCGCAANCCCAAGGACTTTGTGGGCAACTTCCTAGTAGGGACTTAAACCTATCCCAGGCTTGGTACAGATTTTCCATCCTTTTTGTTAGATTTTTAAT
ATGTCGCTTGTCAGCTTTGCTATTTTATCTGACGGAAAAGACCTTATTAAAAATTTCTAAGAAAGATCATCCCAAGTTGTTATGGAATTTGTAGGCTCAG
AGTTCAGCCATTTTTTTTCTTCACTAAGTAGAGAAAAAGGGAATAATGTGAGCCTCACATAATCAGAGTTCACTCTATCTAGAGTGTATGTCACTTATCT
CGAGGAATGTATGTGTCACCAATCTCGAGGAAGTTTTATATATGCACTCGTGGATCCTCATGAGATAGACAAGTGAATTGCCTATTTGTGTGCAATAATT
GCACCATGTTCTACTGCAATTCAAACCTACCACCCAGTGCGGGCCTCCGAATAGTTGAAGTCACCCTGGTGATCTTTGGGATTGCCACATCCCTCACTTT
CATTTATGCCATAACCACTGGTAGTTCTTAACCCTCCACCTTTTTTGGGTTATCAAGTTTCCTAACCACAGGAGGAACAGGACGGTTGTGCCTTCTTTGC
CTTCTCTGGTAATGAACAAATCTCTGCGTTAAGATAGAGGCTCTACCAAACCCTGATCGTTTTACCAGCGAAAACCTGACACAACTTGAAGAAATGGAAA
AGCCAAAATCAAGTTTTCAAACTTAAAAAAAA
>LE_HBa0052E06_SP6_81226 (trimmed for quality and cloning vector)
TGGGCAACTTCCTAGTAGGGACTTAAACCTATCCCAGGCTTGGTACAGATTTTCCATCCTTTTTGTTAGATTTTTAATATGTCGCTTGTCAGCTTTGCTA
TTTTATCTGACGGAAAAGACCTTATTAAAAATTTCTAAGAAAGATCATCCCAAGTTGTTATGGAATTTGTAGGCTCAGAGTTCAGCCATTTTTTTTCTTC
ACTAAGTAGAGAAAAAGGGAATAATGTGAGCCTCACATAATCAGAGTTCACTCTATCTAGAGTGTATGTCACTTATCTCGAGGAATGTATGTGTCACCAA
TCTCGAGGAAGTTTTATATATGCACTCGTGGATCCTCATGAGATAGACAAGTGAATTGCCTATTTGTGTGCAATAATTGCACCATGTTCTACTGCAATTC
AAACCTACCACCCAGTGCGGGCCTCCGAATAGTTGAAGTCACCCTGGTGATCTTTGGGATTGCCACATCCCTCACTTTCATTTATGCCATAACCACTGGT
AGTTCTTAACCCTCCACCTTTTTTGGGTTATCAAGTTTCCTAACCACAGGAGGAACAGGACGGTTGTGCCTTCTTTGCCTTCTCTGGTAATGAACAAATC
TCTGCGTTAAGATAGAGGCTCTACCAAACCCTGATCGTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.972953
Expected error %
0.714622
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0052E06
Clone
Clone name
hba-52e6
LE_HBa0052E06
P052E06
Clone type
BAC
Contamination
none
Estimated length
137,651
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found